Build: #1 was successful
Job: Default Job was successful
Build log
The build generated 445 lines of output. Download or view full build log.
| 11-Feb-2017 13:51:45 | Build Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job #1 (CATS-PYC221-JOB1-1) started building on agent buildserver-2.ncsa.illinois.edu |
| 11-Feb-2017 13:51:45 | Remote Agent |
| 11-Feb-2017 13:51:45 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 |
| 11-Feb-2017 13:51:45 | Executing build Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job #1 (CATS-PYC221-JOB1-1) |
| 11-Feb-2017 13:51:45 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 11-Feb-2017 13:51:45 | Updating source code to revision: 772a3afe8f4fcf44b95a12ab5a19afeb3d645887 |
| 11-Feb-2017 13:51:45 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1/.git'. |
| 11-Feb-2017 13:51:45 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1/.git/ |
| 11-Feb-2017 13:51:46 | Fetching 'refs/heads/bugfix/CATS-729-copy-dataset-extractor-fix' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. |
| 11-Feb-2017 13:51:46 | Warning: Permanently added '[127.0.0.1]:50673' (RSA) to the list of known hosts. |
| 11-Feb-2017 13:51:46 | From ssh://127.0.0.1:50673/cats/pyclowder2 |
| 11-Feb-2017 13:51:46 | * [new branch] bugfix/CATS-729-copy-dataset-extractor-fix -> bugfix/CATS-729-copy-dataset-extractor-fix |
| 11-Feb-2017 13:51:46 | Checking out revision 772a3afe8f4fcf44b95a12ab5a19afeb3d645887. |
| 11-Feb-2017 13:51:46 | Switched to branch 'bugfix/CATS-729-copy-dataset-extractor-fix' |
| 11-Feb-2017 13:51:47 | Updated source code to revision: 772a3afe8f4fcf44b95a12ab5a19afeb3d645887 |
| 11-Feb-2017 13:51:47 | Finished task 'Checkout Default Repository' with result: Success |
| 11-Feb-2017 13:51:47 | Running pre-build action: VCS Version Collector |
| 11-Feb-2017 13:51:47 | Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 11-Feb-2017 13:51:47 | Beginning to execute external process for build 'Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job #1 (CATS-PYC221-JOB1-1)' ... running command line: /home/bamboo/bamboo-agent-home/temp/CATS-PYC221-JOB1-1-ScriptBuildTask-6114806633348705409.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_repository_138084370_git_username= bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_repository_revision_number=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC221-JOB1-1 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 bamboo_buildKey=CATS-PYC221-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=bugfix-CATS-729-copy-dataset-extractor-fix bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=1 bamboo_capability_system_builder_nodejs_Node_js_v6_9_1=/home/bamboo/node-v6.9.1 bamboo_capability_system_builder_nodejs_Node_js_v0_10_28=/home/bamboo/node-v0.10.28 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC221-JOB1-1 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=106758145 bamboo_planName=Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix bamboo_shortPlanKey=PYC221 bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_shortJobKey=JOB1 bamboo_planRepository_revision=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_buildTimeStamp=2017-02-11T13:51:45.133-06:00 bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_buildResultKey=CATS-PYC221-JOB1-1 bamboo_repository_git_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_branch_name=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_buildPlanName=Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job bamboo_repository_138084370_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_1_revision=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_repository_138084370_name=pyclowder2 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=pyclowder2 bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_planRepository_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_138084370_branch_name=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_capability_system_git_executable=/usr/bin/git bamboo_repository_git_username= bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=stash-rep bamboo_planRepository_branchName=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_capability_system_hostname=buildserver-2 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_planRepository_type=stash-rep bamboo_planRepository_1_username= bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_repository_138084370_git_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 bamboo_planKey=CATS-PYC221 bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_repository_138084370_revision_number=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=bugfix/CATS-729-copy-dataset-extractor-fix |
| 11-Feb-2017 13:51:47 | New python executable in /tmp/virtualenv/pyclowder2/bin/python |
| 11-Feb-2017 13:51:49 | Installing setuptools, pip...done. |
| 11-Feb-2017 13:51:50 | Downloading/unpacking enum34==1.1.6 (from -r requirements.txt (line 1)) |
| 11-Feb-2017 13:51:50 | Downloading enum34-1.1.6-py2-none-any.whl |
| 11-Feb-2017 13:51:50 | Downloading/unpacking pika==0.10.0 (from -r requirements.txt (line 2)) |
| 11-Feb-2017 13:51:50 | Downloading/unpacking PyYAML==3.11 (from -r requirements.txt (line 3)) |
| 11-Feb-2017 13:51:51 | Running setup.py (path:/tmp/virtualenv/pyclowder2/build/PyYAML/setup.py) egg_info for package PyYAML |
| 11-Feb-2017 13:51:51 | |
| 11-Feb-2017 13:51:51 | Downloading/unpacking requests==2.10.0 (from -r requirements.txt (line 4)) |
| 11-Feb-2017 13:51:51 | Downloading/unpacking wheel==0.24.0 (from -r requirements.txt (line 5)) |
| 11-Feb-2017 13:51:51 | Downloading/unpacking pytest==3.0.3 (from -r requirements.txt (line 6)) |
| 11-Feb-2017 13:51:51 | Downloading/unpacking pytest-pep8==1.0.6 (from -r requirements.txt (line 7)) |
| 11-Feb-2017 13:51:52 | Downloading pytest-pep8-1.0.6.tar.gz |
| 11-Feb-2017 13:51:52 | Running setup.py (path:/tmp/virtualenv/pyclowder2/build/pytest-pep8/setup.py) egg_info for package pytest-pep8 |
| 11-Feb-2017 13:51:52 | |
| 11-Feb-2017 13:51:52 | warning: no directories found matching 'doc' |
| 11-Feb-2017 13:51:52 | warning: no directories found matching 'test_pep8.py' |
| 11-Feb-2017 13:51:52 | Downloading/unpacking urllib3==1.14 (from -r requirements.txt (line 8)) |
| 11-Feb-2017 13:51:52 | Downloading/unpacking py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 6)) |
| 11-Feb-2017 13:51:52 | Downloading/unpacking pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 11-Feb-2017 13:51:52 | Downloading pytest-cache-1.0.tar.gz |
| 11-Feb-2017 13:51:52 | Running setup.py (path:/tmp/virtualenv/pyclowder2/build/pytest-cache/setup.py) egg_info for package pytest-cache |
| 11-Feb-2017 13:51:52 | |
| 11-Feb-2017 13:51:52 | Downloading/unpacking pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 11-Feb-2017 13:51:52 | Downloading/unpacking execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 11-Feb-2017 13:51:52 | Downloading/unpacking apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 11-Feb-2017 13:51:52 | Downloading apipkg-1.4-py2.py3-none-any.whl |
| 11-Feb-2017 13:51:52 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, pytest, pytest-pep8, urllib3, py, pytest-cache, pep8, execnet, apipkg |
| 11-Feb-2017 13:51:53 | Running setup.py install for PyYAML |
| 11-Feb-2017 13:51:53 | checking if libyaml is compilable |
| 11-Feb-2017 13:51:53 | x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c build/temp.linux-x86_64-2.7/check_libyaml.c -o build/temp.linux-x86_64-2.7/check_libyaml.o |
| 11-Feb-2017 13:51:53 | build/temp.linux-x86_64-2.7/check_libyaml.c:2:18: fatal error: yaml.h: No such file or directory |
| 11-Feb-2017 13:51:53 | #include <yaml.h> |
| 11-Feb-2017 13:51:53 | ^ |
| 11-Feb-2017 13:51:53 | compilation terminated. |
| 11-Feb-2017 13:51:53 | |
| 11-Feb-2017 13:51:53 | libyaml is not found or a compiler error: forcing --without-libyaml |
| 11-Feb-2017 13:51:53 | (if libyaml is installed correctly, you may need to |
| 11-Feb-2017 13:51:53 | specify the option --include-dirs or uncomment and |
| 11-Feb-2017 13:51:53 | modify the parameter include_dirs in setup.cfg) |
| 11-Feb-2017 13:51:53 | |
| 11-Feb-2017 13:51:54 | Running setup.py install for pytest-pep8 |
| 11-Feb-2017 13:51:54 | |
| 11-Feb-2017 13:51:54 | warning: no directories found matching 'doc' |
| 11-Feb-2017 13:51:54 | warning: no directories found matching 'test_pep8.py' |
| 11-Feb-2017 13:51:54 | Running setup.py install for pytest-cache |
| 11-Feb-2017 13:51:54 | |
| 11-Feb-2017 13:51:55 | Successfully installed enum34 pika PyYAML requests wheel pytest pytest-pep8 urllib3 py pytest-cache pep8 execnet apipkg |
| 11-Feb-2017 13:51:55 | Cleaning up... |
| 11-Feb-2017 13:51:55 | ============================= test session starts ============================== |
| 11-Feb-2017 13:51:55 | platform linux2 -- Python 2.7.6, pytest-3.0.3, py-1.4.32, pluggy-0.4.0 |
| 11-Feb-2017 13:51:55 | rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1, inifile: setup.cfg |
| 11-Feb-2017 13:51:55 | plugins: pep8-1.0.6 |
| 11-Feb-2017 13:51:55 | collected 11 items |
| 11-Feb-2017 13:51:55 | |
| 11-Feb-2017 13:51:55 | setup.py . |
| 11-Feb-2017 13:51:55 | pyclowder/__init__.py . |
| 11-Feb-2017 13:51:55 | pyclowder/collections.py . |
| 11-Feb-2017 13:51:55 | pyclowder/connectors.py . |
| 11-Feb-2017 13:51:55 | pyclowder/datasets.py . |
| 11-Feb-2017 13:51:55 | pyclowder/extractors.py . |
| 11-Feb-2017 13:51:55 | pyclowder/files.py . |
| 11-Feb-2017 13:51:55 | pyclowder/sections.py . |
| 11-Feb-2017 13:51:55 | pyclowder/utils.py . |
| 11-Feb-2017 13:51:55 | sample-extractors/echo/echo.py . |
| 11-Feb-2017 13:51:55 | sample-extractors/wordcount/wordcount.py . |
| 11-Feb-2017 13:51:55 | |
| 11-Feb-2017 13:51:55 | generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1/test-reports/results.xml |
| 11-Feb-2017 13:51:55 | ========================== 11 passed in 0.43 seconds =========================== |
| 11-Feb-2017 13:51:55 | Finished task 'pytest' with result: Success |
| 11-Feb-2017 13:51:55 | Starting task 'docker build and push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 11-Feb-2017 13:51:55 | Beginning to execute external process for build 'Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job #1 (CATS-PYC221-JOB1-1)' ... running command line: /bin/sh docker.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_repository_138084370_git_username= bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_repository_revision_number=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC221-JOB1-1 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 bamboo_buildKey=CATS-PYC221-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=bugfix-CATS-729-copy-dataset-extractor-fix bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=1 bamboo_capability_system_builder_nodejs_Node_js_v6_9_1=/home/bamboo/node-v6.9.1 bamboo_capability_system_builder_nodejs_Node_js_v0_10_28=/home/bamboo/node-v0.10.28 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC221-JOB1-1 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=106758145 bamboo_planName=Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix bamboo_shortPlanKey=PYC221 bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt bamboo_shortJobKey=JOB1 bamboo_planRepository_revision=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_buildTimeStamp=2017-02-11T13:51:45.133-06:00 bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1 bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_3=/home/bamboo/bamboo-agent-home/temp/CATS-PYC221-JOB1-1-ScriptBuildTask-6114806633348705409.sh bamboo_buildResultKey=CATS-PYC221-JOB1-1 bamboo_repository_git_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_branch_name=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_buildPlanName=Clowder - pyclowder2 - bugfix-CATS-729-copy-dataset-extractor-fix - Default Job bamboo_repository_138084370_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_1_revision=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_repository_138084370_name=pyclowder2 bamboo_capability_system_builder_command_python3=/usr/bin/python3 bamboo_repository_name=pyclowder2 bamboo_capability_system_docker_executable=/usr/bin/docker bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt bamboo_planRepository_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_138084370_branch_name=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir bamboo_capability_system_git_executable=/usr/bin/git bamboo_repository_git_username= bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13 bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs bamboo_planRepository_1_type=stash-rep bamboo_planRepository_branchName=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7 bamboo_capability_system_hostname=buildserver-2 bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_software_mongo=/usr/bin/mongo bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs bamboo_planRepository_type=stash-rep bamboo_planRepository_1_username= bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66 bamboo_repository_138084370_git_branch=bugfix/CATS-729-copy-dataset-extractor-fix bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4 bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9 bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1 bamboo_planKey=CATS-PYC221 bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_planRepository_username= bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66 bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41 bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh bamboo_repository_138084370_revision_number=772a3afe8f4fcf44b95a12ab5a19afeb3d645887 bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60 bamboo_planRepository_1_branchName=bugfix/CATS-729-copy-dataset-extractor-fix |
| 11-Feb-2017 13:51:55 | Sending build context to Docker daemon 100.4 kB |
| 11-Feb-2017 13:51:55 | |
| 11-Feb-2017 13:51:55 | Step 1 : FROM ubuntu:16.04 |
| 11-Feb-2017 13:51:55 | ---> f49eec89601e |
| 11-Feb-2017 13:51:55 | Step 2 : MAINTAINER Rob Kooper <kooper@illinois.edu> |
| 11-Feb-2017 13:51:56 | ---> Running in 0a2a54c1302c |
| 11-Feb-2017 13:51:56 | ---> eaf077c2b0ac |
| 11-Feb-2017 13:51:56 | Removing intermediate container 0a2a54c1302c |
| 11-Feb-2017 13:51:56 | Step 3 : RUN apt-get -q -q update && apt-get install -y --no-install-recommends netcat python python-pip && pip install --upgrade setuptools && rm -rf /var/lib/apt/lists/* && adduser --system clowder |
| 11-Feb-2017 13:51:56 | ---> Running in ff21bcd80759 |
| 11-Feb-2017 13:52:04 | Reading package lists... |
| 11-Feb-2017 13:52:04 | Building dependency tree... |
| 11-Feb-2017 13:52:04 | Reading state information... |
| 11-Feb-2017 13:52:05 | The following additional packages will be installed: |
| 11-Feb-2017 13:52:05 | ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal |
| 11-Feb-2017 13:52:05 | libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat-traditional |
| 11-Feb-2017 13:52:05 | openssl python-minimal python-pip-whl python2.7 python2.7-minimal |
| 11-Feb-2017 13:52:05 | Suggested packages: |
| 11-Feb-2017 13:52:05 | python-doc python-tk python2.7-doc binutils binfmt-support |
| 11-Feb-2017 13:52:05 | Recommended packages: |
| 11-Feb-2017 13:52:05 | file build-essential python-all-dev python-setuptools python-wheel |
| 11-Feb-2017 13:52:05 | The following NEW packages will be installed: |
| 11-Feb-2017 13:52:05 | ca-certificates libexpat1 libffi6 libpython-stdlib libpython2.7-minimal |
| 11-Feb-2017 13:52:05 | libpython2.7-stdlib libsqlite3-0 libssl1.0.0 mime-support netcat |
| 11-Feb-2017 13:52:05 | netcat-traditional openssl python python-minimal python-pip python-pip-whl |
| 11-Feb-2017 13:52:05 | python2.7 python2.7-minimal |
| 11-Feb-2017 13:52:05 | 0 upgraded, 18 newly installed, 0 to remove and 7 not upgraded. |
| 11-Feb-2017 13:52:05 | Need to get 7515 kB of archives. |
| 11-Feb-2017 13:52:05 | After this operation, 25.1 MB of additional disk space will be used. |
| 11-Feb-2017 13:52:05 | Get:1 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [339 kB] |
| 11-Feb-2017 13:52:05 | Get:2 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7-minimal amd64 2.7.12-1ubuntu0~16.04.1 [1295 kB] |
| 11-Feb-2017 13:52:06 | Get:3 http://archive.ubuntu.com/ubuntu xenial/main amd64 python-minimal amd64 2.7.11-1 [28.2 kB] |
| 11-Feb-2017 13:52:06 | Get:4 http://archive.ubuntu.com/ubuntu xenial/main amd64 mime-support all 3.59ubuntu1 [31.0 kB] |
| 11-Feb-2017 13:52:06 | Get:5 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libexpat1 amd64 2.1.0-7ubuntu0.16.04.2 [71.3 kB] |
| 11-Feb-2017 13:52:06 | Get:6 http://archive.ubuntu.com/ubuntu xenial/main amd64 libffi6 amd64 3.2.1-4 [17.8 kB] |
| 11-Feb-2017 13:52:06 | Get:7 http://archive.ubuntu.com/ubuntu xenial/main amd64 libsqlite3-0 amd64 3.11.0-1ubuntu1 [396 kB] |
| 11-Feb-2017 13:52:06 | Get:8 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libssl1.0.0 amd64 1.0.2g-1ubuntu4.6 [1082 kB] |
| 11-Feb-2017 13:52:06 | Get:9 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 libpython2.7-stdlib amd64 2.7.12-1ubuntu0~16.04.1 [1884 kB] |
| 11-Feb-2017 13:52:06 | Get:10 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 python2.7 amd64 2.7.12-1ubuntu0~16.04.1 [224 kB] |
| 11-Feb-2017 13:52:06 | Get:11 http://archive.ubuntu.com/ubuntu xenial/main amd64 libpython-stdlib amd64 2.7.11-1 [7656 B] |
| 11-Feb-2017 13:52:06 | Get:12 http://archive.ubuntu.com/ubuntu xenial/main amd64 python amd64 2.7.11-1 [137 kB] |
| 11-Feb-2017 13:52:06 | Get:13 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 openssl amd64 1.0.2g-1ubuntu4.6 [492 kB] |
| 11-Feb-2017 13:52:06 | Get:14 http://archive.ubuntu.com/ubuntu xenial/main amd64 ca-certificates all 20160104ubuntu1 [191 kB] |
| 11-Feb-2017 13:52:06 | Get:15 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat-traditional amd64 1.10-41 [60.7 kB] |
| 11-Feb-2017 13:52:06 | Get:16 http://archive.ubuntu.com/ubuntu xenial/universe amd64 netcat all 1.10-41 [3438 B] |
| 11-Feb-2017 13:52:06 | Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip-whl all 8.1.1-2ubuntu0.4 [1110 kB] |
| 11-Feb-2017 13:52:06 | Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-pip all 8.1.1-2ubuntu0.4 [144 kB] |
| 11-Feb-2017 13:52:06 | debconf: delaying package configuration, since apt-utils is not installed |
| 11-Feb-2017 13:52:06 | Fetched 7515 kB in 1s (5583 kB/s) |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libpython2.7-minimal:amd64. |
| 11-Feb-2017 13:52:07 | (Reading database ... |
| 11-Feb-2017 13:52:07 | (Reading database ... 5% |
| 11-Feb-2017 13:52:07 | (Reading database ... 10% |
| 11-Feb-2017 13:52:07 | (Reading database ... 15% |
| 11-Feb-2017 13:52:07 | (Reading database ... 20% |
| 11-Feb-2017 13:52:07 | (Reading database ... 25% |
| 11-Feb-2017 13:52:07 | (Reading database ... 30% |
| 11-Feb-2017 13:52:07 | (Reading database ... 35% |
| 11-Feb-2017 13:52:07 | (Reading database ... 40% |
| 11-Feb-2017 13:52:07 | (Reading database ... 45% |
| 11-Feb-2017 13:52:07 | (Reading database ... 50% |
| 11-Feb-2017 13:52:07 | (Reading database ... 55% |
| 11-Feb-2017 13:52:07 | (Reading database ... 60% |
| 11-Feb-2017 13:52:07 | (Reading database ... 65% |
| 11-Feb-2017 13:52:07 | (Reading database ... 70% |
| 11-Feb-2017 13:52:07 | (Reading database ... 75% |
| 11-Feb-2017 13:52:07 | (Reading database ... 80% |
| 11-Feb-2017 13:52:07 | (Reading database ... 85% |
| 11-Feb-2017 13:52:07 | (Reading database ... 90% |
| 11-Feb-2017 13:52:07 | (Reading database ... 95% |
| 11-Feb-2017 13:52:07 | (Reading database ... 100% |
| 11-Feb-2017 13:52:07 | (Reading database ... 7256 files and directories currently installed.) |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libpython2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package python2.7-minimal. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../python2.7-minimal_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking python2.7-minimal (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package python-minimal. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../python-minimal_2.7.11-1_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking python-minimal (2.7.11-1) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package mime-support. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../mime-support_3.59ubuntu1_all.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking mime-support (3.59ubuntu1) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libexpat1:amd64. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libexpat1_2.1.0-7ubuntu0.16.04.2_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libexpat1:amd64 (2.1.0-7ubuntu0.16.04.2) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libffi6:amd64. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libffi6_3.2.1-4_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libffi6:amd64 (3.2.1-4) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libsqlite3-0:amd64. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libsqlite3-0_3.11.0-1ubuntu1_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libsqlite3-0:amd64 (3.11.0-1ubuntu1) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libssl1.0.0:amd64. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libssl1.0.0_1.0.2g-1ubuntu4.6_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libssl1.0.0:amd64 (1.0.2g-1ubuntu4.6) ... |
| 11-Feb-2017 13:52:07 | Selecting previously unselected package libpython2.7-stdlib:amd64. |
| 11-Feb-2017 13:52:07 | Preparing to unpack .../libpython2.7-stdlib_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
| 11-Feb-2017 13:52:07 | Unpacking libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:08 | Selecting previously unselected package python2.7. |
| 11-Feb-2017 13:52:08 | Preparing to unpack .../python2.7_2.7.12-1ubuntu0~16.04.1_amd64.deb ... |
| 11-Feb-2017 13:52:08 | Unpacking python2.7 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:08 | Selecting previously unselected package libpython-stdlib:amd64. |
| 11-Feb-2017 13:52:08 | Preparing to unpack .../libpython-stdlib_2.7.11-1_amd64.deb ... |
| 11-Feb-2017 13:52:08 | Unpacking libpython-stdlib:amd64 (2.7.11-1) ... |
| 11-Feb-2017 13:52:08 | Processing triggers for libc-bin (2.23-0ubuntu5) ... |
| 11-Feb-2017 13:52:08 | Setting up libpython2.7-minimal:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:08 | Setting up python2.7-minimal (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:09 | Linking and byte-compiling packages for runtime python2.7... |
| 11-Feb-2017 13:52:09 | Setting up python-minimal (2.7.11-1) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package python. |
| 11-Feb-2017 13:52:09 | (Reading database ... |
| 11-Feb-2017 13:52:09 | (Reading database ... 5% |
| 11-Feb-2017 13:52:09 | (Reading database ... 10% |
| 11-Feb-2017 13:52:09 | (Reading database ... 15% |
| 11-Feb-2017 13:52:09 | (Reading database ... 20% |
| 11-Feb-2017 13:52:09 | (Reading database ... 25% |
| 11-Feb-2017 13:52:09 | (Reading database ... 30% |
| 11-Feb-2017 13:52:09 | (Reading database ... 35% |
| 11-Feb-2017 13:52:09 | (Reading database ... 40% |
| 11-Feb-2017 13:52:09 | (Reading database ... 45% |
| 11-Feb-2017 13:52:09 | (Reading database ... 50% |
| 11-Feb-2017 13:52:09 | (Reading database ... 55% |
| 11-Feb-2017 13:52:09 | (Reading database ... 60% |
| 11-Feb-2017 13:52:09 | (Reading database ... 65% |
| 11-Feb-2017 13:52:09 | (Reading database ... 70% |
| 11-Feb-2017 13:52:09 | (Reading database ... 75% |
| 11-Feb-2017 13:52:09 | (Reading database ... 80% |
| 11-Feb-2017 13:52:09 | (Reading database ... 85% |
| 11-Feb-2017 13:52:09 | (Reading database ... 90% |
| 11-Feb-2017 13:52:09 | (Reading database ... 95% |
| 11-Feb-2017 13:52:09 | (Reading database ... 100% |
| 11-Feb-2017 13:52:09 | (Reading database ... 8067 files and directories currently installed.) |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../python_2.7.11-1_amd64.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking python (2.7.11-1) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package openssl. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../openssl_1.0.2g-1ubuntu4.6_amd64.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking openssl (1.0.2g-1ubuntu4.6) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package ca-certificates. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../ca-certificates_20160104ubuntu1_all.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking ca-certificates (20160104ubuntu1) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package netcat-traditional. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../netcat-traditional_1.10-41_amd64.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking netcat-traditional (1.10-41) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package netcat. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../netcat_1.10-41_all.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking netcat (1.10-41) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package python-pip-whl. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../python-pip-whl_8.1.1-2ubuntu0.4_all.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking python-pip-whl (8.1.1-2ubuntu0.4) ... |
| 11-Feb-2017 13:52:09 | Selecting previously unselected package python-pip. |
| 11-Feb-2017 13:52:09 | Preparing to unpack .../python-pip_8.1.1-2ubuntu0.4_all.deb ... |
| 11-Feb-2017 13:52:09 | Unpacking python-pip (8.1.1-2ubuntu0.4) ... |
| 11-Feb-2017 13:52:09 | Setting up mime-support (3.59ubuntu1) ... |
| 11-Feb-2017 13:52:09 | Setting up libexpat1:amd64 (2.1.0-7ubuntu0.16.04.2) ... |
| 11-Feb-2017 13:52:09 | Setting up libffi6:amd64 (3.2.1-4) ... |
| 11-Feb-2017 13:52:09 | Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1) ... |
| 11-Feb-2017 13:52:09 | Setting up libssl1.0.0:amd64 (1.0.2g-1ubuntu4.6) ... |
| 11-Feb-2017 13:52:09 | debconf: unable to initialize frontend: Dialog |
| 11-Feb-2017 13:52:09 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
| 11-Feb-2017 13:52:09 | debconf: falling back to frontend: Readline |
| 11-Feb-2017 13:52:09 | debconf: unable to initialize frontend: Readline |
| 11-Feb-2017 13:52:09 | debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) |
| 11-Feb-2017 13:52:09 | debconf: falling back to frontend: Teletype |
| 11-Feb-2017 13:52:09 | Setting up libpython2.7-stdlib:amd64 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:09 | Setting up python2.7 (2.7.12-1ubuntu0~16.04.1) ... |
| 11-Feb-2017 13:52:11 | Setting up libpython-stdlib:amd64 (2.7.11-1) ... |
| 11-Feb-2017 13:52:11 | Setting up python (2.7.11-1) ... |
| 11-Feb-2017 13:52:11 | Setting up openssl (1.0.2g-1ubuntu4.6) ... |
| 11-Feb-2017 13:52:11 | Setting up ca-certificates (20160104ubuntu1) ... |
| 11-Feb-2017 13:52:11 | debconf: unable to initialize frontend: Dialog |
| 11-Feb-2017 13:52:11 | debconf: (TERM is not set, so the dialog frontend is not usable.) |
| 11-Feb-2017 13:52:11 | debconf: falling back to frontend: Readline |
| 11-Feb-2017 13:52:11 | debconf: unable to initialize frontend: Readline |
| 11-Feb-2017 13:52:11 | debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.22.1 /usr/local/share/perl/5.22.1 /usr/lib/x86_64-linux-gnu/perl5/5.22 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.22 /usr/share/perl/5.22 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) |
| 11-Feb-2017 13:52:11 | debconf: falling back to frontend: Teletype |
| 11-Feb-2017 13:52:12 | Setting up netcat-traditional (1.10-41) ... |
| 11-Feb-2017 13:52:12 | update-alternatives: using /bin/nc.traditional to provide /bin/nc (nc) in auto mode |
| 11-Feb-2017 13:52:12 | Setting up netcat (1.10-41) ... |
| 11-Feb-2017 13:52:12 | Setting up python-pip-whl (8.1.1-2ubuntu0.4) ... |
| 11-Feb-2017 13:52:12 | Setting up python-pip (8.1.1-2ubuntu0.4) ... |
| 11-Feb-2017 13:52:12 | Processing triggers for libc-bin (2.23-0ubuntu5) ... |
| 11-Feb-2017 13:52:12 | Processing triggers for ca-certificates (20160104ubuntu1) ... |
| 11-Feb-2017 13:52:12 | Updating certificates in /etc/ssl/certs... |
| 11-Feb-2017 13:52:16 | 173 added, 0 removed; done. |
| 11-Feb-2017 13:52:16 | Running hooks in /etc/ca-certificates/update.d... |
| 11-Feb-2017 13:52:16 | done. |
| 11-Feb-2017 13:52:17 | Collecting setuptools |
| 11-Feb-2017 13:52:17 | Downloading setuptools-34.1.1-py2.py3-none-any.whl (389kB) |
| 11-Feb-2017 13:52:17 | Collecting appdirs>=1.4.0 (from setuptools) |
| 11-Feb-2017 13:52:17 | Downloading appdirs-1.4.0-py2.py3-none-any.whl |
| 11-Feb-2017 13:52:17 | Collecting packaging>=16.8 (from setuptools) |
| 11-Feb-2017 13:52:17 | Downloading packaging-16.8-py2.py3-none-any.whl |
| 11-Feb-2017 13:52:17 | Collecting six>=1.6.0 (from setuptools) |
| 11-Feb-2017 13:52:17 | Downloading six-1.10.0-py2.py3-none-any.whl |
| 11-Feb-2017 13:52:17 | Collecting pyparsing (from packaging>=16.8->setuptools) |
| 11-Feb-2017 13:52:18 | Downloading pyparsing-2.1.10-py2.py3-none-any.whl (56kB) |
| 11-Feb-2017 13:52:18 | Installing collected packages: appdirs, pyparsing, six, packaging, setuptools |
| 11-Feb-2017 13:52:18 | Successfully installed appdirs-1.4.0 packaging-16.8 pyparsing-2.1.10 setuptools-34.1.1 six-1.10.0 |
| 11-Feb-2017 13:52:19 | You are using pip version 8.1.1, however version 9.0.1 is available. |
| 11-Feb-2017 13:52:19 | You should consider upgrading via the 'pip install --upgrade pip' command. |
| 11-Feb-2017 13:52:19 | Adding system user `clowder' (UID 105) ... |
| 11-Feb-2017 13:52:19 | Adding new user `clowder' (UID 105) with group `nogroup' ... |
| 11-Feb-2017 13:52:19 | Creating home directory `/home/clowder' ... |
| 11-Feb-2017 13:52:21 | ---> 9b9f2b22358a |
| 11-Feb-2017 13:52:21 | Removing intermediate container ff21bcd80759 |
| 11-Feb-2017 13:52:21 | Step 4 : COPY pyclowder /tmp/pyclowder/pyclowder |
| 11-Feb-2017 13:52:22 | ---> 98c8d21223b1 |
| 11-Feb-2017 13:52:22 | Removing intermediate container 6a3dd7e90993 |
| 11-Feb-2017 13:52:22 | Step 5 : COPY setup.py requirements.txt /tmp/pyclowder/ |
| 11-Feb-2017 13:52:22 | ---> 8fb6c9c405f3 |
| 11-Feb-2017 13:52:22 | Removing intermediate container 7e747ed2c2d5 |
| 11-Feb-2017 13:52:22 | Step 6 : RUN pip install --upgrade -r /tmp/pyclowder/requirements.txt && pip install --upgrade /tmp/pyclowder && rm -rf /tmp/pyclowder |
| 11-Feb-2017 13:52:22 | ---> Running in db2487270637 |
| 11-Feb-2017 13:52:24 | Collecting enum34==1.1.6 (from -r /tmp/pyclowder/requirements.txt (line 1)) |
| 11-Feb-2017 13:52:24 | Downloading enum34-1.1.6-py2-none-any.whl |
| 11-Feb-2017 13:52:24 | Collecting pika==0.10.0 (from -r /tmp/pyclowder/requirements.txt (line 2)) |
| 11-Feb-2017 13:52:24 | Downloading pika-0.10.0-py2.py3-none-any.whl (92kB) |
| 11-Feb-2017 13:52:24 | Collecting PyYAML==3.11 (from -r /tmp/pyclowder/requirements.txt (line 3)) |
| 11-Feb-2017 13:52:24 | Downloading PyYAML-3.11.zip (371kB) |
| 11-Feb-2017 13:52:25 | Collecting requests==2.10.0 (from -r /tmp/pyclowder/requirements.txt (line 4)) |
| 11-Feb-2017 13:52:25 | Downloading requests-2.10.0-py2.py3-none-any.whl (506kB) |
| 11-Feb-2017 13:52:25 | Collecting wheel==0.24.0 (from -r /tmp/pyclowder/requirements.txt (line 5)) |
| 11-Feb-2017 13:52:25 | Downloading wheel-0.24.0-py2.py3-none-any.whl (63kB) |
| 11-Feb-2017 13:52:25 | Collecting pytest==3.0.3 (from -r /tmp/pyclowder/requirements.txt (line 6)) |
| 11-Feb-2017 13:52:25 | Downloading pytest-3.0.3-py2.py3-none-any.whl (169kB) |
| 11-Feb-2017 13:52:25 | Collecting pytest-pep8==1.0.6 (from -r /tmp/pyclowder/requirements.txt (line 7)) |
| 11-Feb-2017 13:52:25 | Downloading pytest-pep8-1.0.6.tar.gz |
| 11-Feb-2017 13:52:26 | Collecting urllib3==1.14 (from -r /tmp/pyclowder/requirements.txt (line 8)) |
| 11-Feb-2017 13:52:26 | Downloading urllib3-1.14-py2.py3-none-any.whl (89kB) |
| 11-Feb-2017 13:52:26 | Collecting py>=1.4.29 (from pytest==3.0.3->-r /tmp/pyclowder/requirements.txt (line 6)) |
| 11-Feb-2017 13:52:26 | Downloading py-1.4.32-py2.py3-none-any.whl (82kB) |
| 11-Feb-2017 13:52:26 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
| 11-Feb-2017 13:52:26 | Downloading pytest-cache-1.0.tar.gz |
| 11-Feb-2017 13:52:27 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
| 11-Feb-2017 13:52:27 | Downloading pep8-1.7.0-py2.py3-none-any.whl (41kB) |
| 11-Feb-2017 13:52:27 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
| 11-Feb-2017 13:52:27 | Downloading execnet-1.4.1-py2.py3-none-any.whl (40kB) |
| 11-Feb-2017 13:52:27 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r /tmp/pyclowder/requirements.txt (line 7)) |
| 11-Feb-2017 13:52:27 | Downloading apipkg-1.4-py2.py3-none-any.whl |
| 11-Feb-2017 13:52:27 | Building wheels for collected packages: PyYAML, pytest-pep8, pytest-cache |
| 11-Feb-2017 13:52:27 | Running setup.py bdist_wheel for PyYAML: started |
| 11-Feb-2017 13:52:27 | Running setup.py bdist_wheel for PyYAML: finished with status 'error' |
| 11-Feb-2017 13:52:27 | Failed building wheel for PyYAML |
| 11-Feb-2017 13:52:27 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-pmxQ_c/PyYAML/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpYbUpKdpip-wheel- --python-tag cp27: |
| 11-Feb-2017 13:52:27 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 11-Feb-2017 13:52:27 | or: -c --help [cmd1 cmd2 ...] |
| 11-Feb-2017 13:52:27 | or: -c --help-commands |
| 11-Feb-2017 13:52:27 | or: -c cmd --help |
| 11-Feb-2017 13:52:27 | |
| 11-Feb-2017 13:52:27 | error: invalid command 'bdist_wheel' |
| 11-Feb-2017 13:52:27 | |
| 11-Feb-2017 13:52:27 | ---------------------------------------- |
| 11-Feb-2017 13:52:27 | Running setup.py clean for PyYAML |
| 11-Feb-2017 13:52:28 | Running setup.py bdist_wheel for pytest-pep8: started |
| 11-Feb-2017 13:52:28 | Running setup.py bdist_wheel for pytest-pep8: finished with status 'error' |
| 11-Feb-2017 13:52:28 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-pmxQ_c/pytest-pep8/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpHQe2dspip-wheel- --python-tag cp27: |
| 11-Feb-2017 13:52:28 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 11-Feb-2017 13:52:28 | or: -c --help [cmd1 cmd2 ...] |
| 11-Feb-2017 13:52:28 | or: -c --help-commands |
| 11-Feb-2017 13:52:28 | or: -c cmd --help |
| 11-Feb-2017 13:52:28 | |
| 11-Feb-2017 13:52:28 | error: invalid command 'bdist_wheel' |
| 11-Feb-2017 13:52:28 | |
| 11-Feb-2017 13:52:28 | ---------------------------------------- |
| 11-Feb-2017 13:52:28 | Failed building wheel for pytest-pep8 |
| 11-Feb-2017 13:52:28 | Running setup.py clean for pytest-pep8 |
| 11-Feb-2017 13:52:29 | Running setup.py bdist_wheel for pytest-cache: started |
| 11-Feb-2017 13:52:29 | Running setup.py bdist_wheel for pytest-cache: finished with status 'error' |
| 11-Feb-2017 13:52:29 | Failed building wheel for pytest-cache |
| 11-Feb-2017 13:52:29 | Complete output from command /usr/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-pmxQ_c/pytest-cache/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpQlkSP6pip-wheel- --python-tag cp27: |
| 11-Feb-2017 13:52:29 | usage: -c [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] |
| 11-Feb-2017 13:52:29 | or: -c --help [cmd1 cmd2 ...] |
| 11-Feb-2017 13:52:29 | or: -c --help-commands |
| 11-Feb-2017 13:52:29 | or: -c cmd --help |
| 11-Feb-2017 13:52:29 | |
| 11-Feb-2017 13:52:29 | error: invalid command 'bdist_wheel' |
| 11-Feb-2017 13:52:29 | |
| 11-Feb-2017 13:52:29 | ---------------------------------------- |
| 11-Feb-2017 13:52:29 | Running setup.py clean for pytest-cache |
| 11-Feb-2017 13:52:29 | Failed to build PyYAML pytest-pep8 pytest-cache |
| 11-Feb-2017 13:52:29 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, apipkg, execnet, pytest-cache, pep8, pytest-pep8, urllib3 |
| 11-Feb-2017 13:52:30 | Running setup.py install for PyYAML: started |
| 11-Feb-2017 13:52:30 | Running setup.py install for PyYAML: finished with status 'done' |
| 11-Feb-2017 13:52:31 | Running setup.py install for pytest-cache: started |
| 11-Feb-2017 13:52:32 | Running setup.py install for pytest-cache: finished with status 'done' |
| 11-Feb-2017 13:52:32 | Running setup.py install for pytest-pep8: started |
| 11-Feb-2017 13:52:32 | Running setup.py install for pytest-pep8: finished with status 'done' |
| 11-Feb-2017 13:52:33 | Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.32 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0 |
| 11-Feb-2017 13:52:33 | You are using pip version 8.1.1, however version 9.0.1 is available. |
| 11-Feb-2017 13:52:33 | You should consider upgrading via the 'pip install --upgrade pip' command. |
| 11-Feb-2017 13:52:35 | Processing /tmp/pyclowder |
| 11-Feb-2017 13:52:35 | Installing collected packages: pyclowder |
| 11-Feb-2017 13:52:35 | Running setup.py install for pyclowder: started |
| 11-Feb-2017 13:52:36 | Running setup.py install for pyclowder: finished with status 'done' |
| 11-Feb-2017 13:52:36 | Successfully installed pyclowder-2.0.0 |
| 11-Feb-2017 13:52:36 | You are using pip version 8.1.1, however version 9.0.1 is available. |
| 11-Feb-2017 13:52:36 | You should consider upgrading via the 'pip install --upgrade pip' command. |
| 11-Feb-2017 13:52:37 | ---> 9fb5e94c5bbe |
| 11-Feb-2017 13:52:37 | Removing intermediate container db2487270637 |
| 11-Feb-2017 13:52:37 | Successfully built 9fb5e94c5bbe |
| 11-Feb-2017 13:52:37 | Untagged: 23463:latest |
| 11-Feb-2017 13:52:37 | Sending build context to Docker daemon 11.78 kB |
| 11-Feb-2017 13:52:37 | |
| 11-Feb-2017 13:52:37 | Step 1 : FROM clowder/pyclowder:2 |
| 11-Feb-2017 13:52:37 | ---> 9fb5e94c5bbe |
| 11-Feb-2017 13:52:37 | Step 2 : MAINTAINER Rob Kooper <kooper@illinois.edu> |
| 11-Feb-2017 13:52:37 | ---> Running in 4f11d0674162 |
| 11-Feb-2017 13:52:37 | ---> fb94794b6b0e |
| 11-Feb-2017 13:52:37 | Removing intermediate container 4f11d0674162 |
| 11-Feb-2017 13:52:37 | Step 3 : ENV RABBITMQ_URI "" RABBITMQ_EXCHANGE "clowder" RABBITMQ_QUEUE "ncsa.wordcount" REGISTRATION_ENDPOINTS "https://clowder.ncsa.illinois.edu/extractors" MAIN_SCRIPT "wordcount.py" |
| 11-Feb-2017 13:52:37 | ---> Running in bf860196c71a |
| 11-Feb-2017 13:52:38 | ---> 4f28d632076e |
| 11-Feb-2017 13:52:38 | Removing intermediate container bf860196c71a |
| 11-Feb-2017 13:52:38 | Step 4 : USER clowder |
| 11-Feb-2017 13:52:38 | ---> Running in 2b0828fd2481 |
| 11-Feb-2017 13:52:38 | ---> d72ff82ad391 |
| 11-Feb-2017 13:52:38 | Removing intermediate container 2b0828fd2481 |
| 11-Feb-2017 13:52:38 | Step 5 : COPY entrypoint.sh *.py extractor_info.json /home/clowder/ |
| 11-Feb-2017 13:52:38 | ---> 462111cd5954 |
| 11-Feb-2017 13:52:38 | Removing intermediate container 825e2406dc7e |
| 11-Feb-2017 13:52:38 | Step 6 : ENTRYPOINT /home/clowder/entrypoint.sh |
| 11-Feb-2017 13:52:38 | ---> Running in 0e3d5e9dab33 |
| 11-Feb-2017 13:52:38 | ---> 6efe86867ca3 |
| 11-Feb-2017 13:52:38 | Removing intermediate container 0e3d5e9dab33 |
| 11-Feb-2017 13:52:38 | Step 7 : CMD extractor |
| 11-Feb-2017 13:52:38 | ---> Running in 1f11885f2402 |
| 11-Feb-2017 13:52:38 | ---> 78a39f6d877a |
| 11-Feb-2017 13:52:38 | Removing intermediate container 1f11885f2402 |
| 11-Feb-2017 13:52:38 | Successfully built 78a39f6d877a |
| 11-Feb-2017 13:52:38 | Untagged: 23463:latest |
| 11-Feb-2017 13:52:38 | Untagged: clowder/pyclowder:latest |
| 11-Feb-2017 13:52:38 | Untagged: clowder/extractors-wordcount:latest |
| 11-Feb-2017 13:52:38 | Finished task 'docker build and push' with result: Success |
| 11-Feb-2017 13:52:38 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
| 11-Feb-2017 13:52:39 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC221-JOB1... |
| 11-Feb-2017 13:52:39 | Finished task 'test results' with result: Success |
| 11-Feb-2017 13:52:39 | Running post build plugin 'Docker Container Cleanup' |
| 11-Feb-2017 13:52:39 | Running post build plugin 'NCover Results Collector' |
| 11-Feb-2017 13:52:39 | Running post build plugin 'Clover Results Collector' |
| 11-Feb-2017 13:52:39 | Running post build plugin 'npm Cache Cleanup' |
| 11-Feb-2017 13:52:39 | Running post build plugin 'Artifact Copier' |
| 11-Feb-2017 13:52:39 | Finalising the build... |
| 11-Feb-2017 13:52:39 | Stopping timer. |
| 11-Feb-2017 13:52:39 | Build CATS-PYC221-JOB1-1 completed. |
| 11-Feb-2017 13:52:39 | Running on server: post build plugin 'NCover Results Collector' |
| 11-Feb-2017 13:52:39 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 11-Feb-2017 13:52:39 | Running on server: post build plugin 'Clover Delta Calculator' |
| 11-Feb-2017 13:52:39 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 11-Feb-2017 13:52:39 | All post build plugins have finished |
| 11-Feb-2017 13:52:39 | Generating build results summary... |
| 11-Feb-2017 13:52:39 | Saving build results to disk... |
| 11-Feb-2017 13:52:39 | Logging substituted variables... |
| 11-Feb-2017 13:52:39 | Indexing build results... |
| 11-Feb-2017 13:52:39 | Finished building CATS-PYC221-JOB1-1. |