Build: #2 failed
Job: Default Job failed
Build log
The build generated 114 lines of output. Download or view full build log.
| 09-Sep-2017 17:30:06 | Build Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #2 (CATS-PYC248-JOB1-2) started building on agent buildserver-3.os.ncsa.edu |
| 09-Sep-2017 17:30:06 | Remote agent on host buildserver-3.os.ncsa.edu |
| 09-Sep-2017 17:30:06 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1 |
| 09-Sep-2017 17:30:06 | Executing build Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #2 (CATS-PYC248-JOB1-2) |
| 09-Sep-2017 17:30:06 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 09-Sep-2017 17:30:06 | Updating source code to revision: 68e7f70bc1fc9865fe32c36cb9a2b9528bbf5065 |
| 09-Sep-2017 17:30:38 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/.git'. |
| 09-Sep-2017 17:30:38 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/.git/ |
| 09-Sep-2017 17:30:39 | Fetching 'refs/heads/CATS-784-python3-compatible' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. |
| 09-Sep-2017 17:30:39 | Warning: Permanently added '[127.0.0.1]:42174' (RSA) to the list of known hosts. |
| 09-Sep-2017 17:30:39 | From ssh://127.0.0.1:42174/cats/pyclowder2 |
| 09-Sep-2017 17:30:39 | * [new branch] CATS-784-python3-compatible -> CATS-784-python3-compatible |
| 09-Sep-2017 17:30:39 | Checking out revision 68e7f70bc1fc9865fe32c36cb9a2b9528bbf5065. |
| 09-Sep-2017 17:30:39 | Switched to branch 'CATS-784-python3-compatible' |
| 09-Sep-2017 17:30:39 | Updated source code to revision: 68e7f70bc1fc9865fe32c36cb9a2b9528bbf5065 |
| 09-Sep-2017 17:30:39 | Finished task 'Checkout Default Repository' with result: Success |
| 09-Sep-2017 17:30:39 | Running pre-build action: VCS Version Collector |
| 09-Sep-2017 17:30:39 | Starting task 'pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 09-Sep-2017 17:30:39 | Beginning to execute external process for build 'Clowder - pyclowder2 - CATS-784-python3-compatible - Default Job #2 (CATS-PYC248-JOB1-2)' ... running command line: /home/bamboo/bamboo-agent-home/temp/CATS-PYC248-JOB1-2-ScriptBuildTask-5528726749916569130.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=CATS-784-python3-compatible bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_planRepository_1_branchDisplayName=CATS-784-python3-compatible bamboo_repository_revision_number=68e7f70bc1fc9865fe32c36cb9a2b9528bbf5065 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC248-JOB1-2 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_planRepository_1_name=pyclowder2 bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1 bamboo_buildKey=CATS-PYC248-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=CATS-784-python3-compatible bamboo_repository_148209759_previous_revision_number=ef3ff64803d13a9f87616673965d3087f9acb04b bamboo_repository_148209759_git_username= bamboo_repository_148209759_revision_number=68e7f70bc1fc9865fe32c36cb9a2b9528bbf5065 bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=2 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC248-JOB1-2 bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=143032321 bamboo_planName=Clowder - 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| 09-Sep-2017 17:30:40 | New python executable in /tmp/virtualenv/pyclowder2/bin/python2 |
| 09-Sep-2017 17:30:40 | Also creating executable in /tmp/virtualenv/pyclowder2/bin/python |
| 09-Sep-2017 17:30:43 | Installing setuptools, pkg_resources, pip, wheel...done. |
| 09-Sep-2017 17:30:43 | Running virtualenv with interpreter /usr/bin/python2 |
| 09-Sep-2017 17:30:44 | Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) |
| 09-Sep-2017 17:30:44 | Using cached enum34-1.1.6-py2-none-any.whl |
| 09-Sep-2017 17:30:44 | Collecting pika==0.10.0 (from -r requirements.txt (line 2)) |
| 09-Sep-2017 17:30:44 | Using cached pika-0.10.0-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:44 | Collecting PyYAML==3.11 (from -r requirements.txt (line 3)) |
| 09-Sep-2017 17:30:44 | Collecting requests==2.10.0 (from -r requirements.txt (line 4)) |
| 09-Sep-2017 17:30:44 | Using cached requests-2.10.0-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:44 | Collecting wheel==0.24.0 (from -r requirements.txt (line 5)) |
| 09-Sep-2017 17:30:44 | Using cached wheel-0.24.0-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:44 | Collecting pytest==3.0.3 (from -r requirements.txt (line 6)) |
| 09-Sep-2017 17:30:44 | Using cached pytest-3.0.3-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:44 | Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 7)) |
| 09-Sep-2017 17:30:44 | Collecting urllib3==1.14 (from -r requirements.txt (line 8)) |
| 09-Sep-2017 17:30:44 | Using cached urllib3-1.14-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:45 | Collecting py>=1.4.29 (from pytest==3.0.3->-r requirements.txt (line 6)) |
| 09-Sep-2017 17:30:45 | Using cached py-1.4.34-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:45 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 09-Sep-2017 17:30:45 | Using cached pep8-1.7.0-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:45 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 09-Sep-2017 17:30:45 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 09-Sep-2017 17:30:45 | Using cached execnet-1.4.1-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:45 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 7)) |
| 09-Sep-2017 17:30:45 | Using cached apipkg-1.4-py2.py3-none-any.whl |
| 09-Sep-2017 17:30:45 | Installing collected packages: enum34, pika, PyYAML, requests, wheel, py, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8, urllib3 |
| 09-Sep-2017 17:30:45 | Found existing installation: wheel 0.30.0a0 |
| 09-Sep-2017 17:30:45 | Uninstalling wheel-0.30.0a0: |
| 09-Sep-2017 17:30:45 | Successfully uninstalled wheel-0.30.0a0 |
| 09-Sep-2017 17:30:45 | Successfully installed PyYAML-3.11 apipkg-1.4 enum34-1.1.6 execnet-1.4.1 pep8-1.7.0 pika-0.10.0 py-1.4.34 pytest-3.0.3 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.10.0 urllib3-1.14 wheel-0.24.0 |
| 09-Sep-2017 17:30:46 | ============================= test session starts ============================== |
| 09-Sep-2017 17:30:46 | platform linux2 -- Python 2.7.12, pytest-3.0.3, py-1.4.34, pluggy-0.4.0 |
| 09-Sep-2017 17:30:46 | rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1, inifile: setup.cfg |
| 09-Sep-2017 17:30:46 | plugins: pep8-1.0.6 |
| 09-Sep-2017 17:30:46 | collected 12 items |
| 09-Sep-2017 17:30:46 | |
| 09-Sep-2017 17:30:46 | setup.py . |
| 09-Sep-2017 17:30:46 | pyclowder/__init__.py . |
| 09-Sep-2017 17:30:46 | pyclowder/collections.py . |
| 09-Sep-2017 17:30:46 | pyclowder/connectors.py . |
| 09-Sep-2017 17:30:46 | pyclowder/datasets.py . |
| 09-Sep-2017 17:30:46 | pyclowder/extractors.py F |
| 09-Sep-2017 17:30:46 | pyclowder/files.py . |
| 09-Sep-2017 17:30:46 | pyclowder/geostreams.py . |
| 09-Sep-2017 17:30:46 | pyclowder/sections.py . |
| 09-Sep-2017 17:30:46 | pyclowder/utils.py . |
| 09-Sep-2017 17:30:46 | sample-extractors/echo/echo.py . |
| 09-Sep-2017 17:30:46 | sample-extractors/wordcount/wordcount.py . |
| 09-Sep-2017 17:30:46 | |
| 09-Sep-2017 17:30:46 | generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/test-reports/results.xml |
| 09-Sep-2017 17:30:46 | =================================== FAILURES =================================== |
| 09-Sep-2017 17:30:46 | __________________________________ PEP8-check __________________________________ |
| 09-Sep-2017 17:30:46 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/pyclowder/extractors.py:87:37: E128 continuation line under-indented for visual indent |
| 09-Sep-2017 17:30:46 | default=None, action='append', |
| 09-Sep-2017 17:30:46 | ^ |
| 09-Sep-2017 17:30:46 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/pyclowder/extractors.py:88:37: E128 continuation line under-indented for visual indent |
| 09-Sep-2017 17:30:46 | help='pickle file that needs to be processed (only needed for HPC)') |
| 09-Sep-2017 17:30:46 | ^ |
| 09-Sep-2017 17:30:46 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/pyclowder/extractors.py:91:37: E128 continuation line under-indented for visual indent |
| 09-Sep-2017 17:30:46 | default=None, action='append', |
| 09-Sep-2017 17:30:46 | ^ |
| 09-Sep-2017 17:30:46 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/pyclowder/extractors.py:92:37: E128 continuation line under-indented for visual indent |
| 09-Sep-2017 17:30:46 | help='pickle file that needs to be processed (only needed for HPC)') |
| 09-Sep-2017 17:30:46 | ^ |
| 09-Sep-2017 17:30:46 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1/pyclowder/extractors.py:143:44: E272 multiple spaces before keyword |
| 09-Sep-2017 17:30:46 | if not self.args.nobind and sys.version_info.major == 2: |
| 09-Sep-2017 17:30:46 | ^ |
| 09-Sep-2017 17:30:46 | |
| 09-Sep-2017 17:30:46 | ===================== 1 failed, 11 passed in 0.24 seconds ====================== |
| 09-Sep-2017 17:30:46 | Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC248-JOB1-2-ScriptBuildTask-5528726749916569130.sh] was 1 while expected 0 |
| 09-Sep-2017 17:30:46 | Finished task 'pytest' with result: Failed |
| 09-Sep-2017 17:30:46 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
| 09-Sep-2017 17:30:46 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC248-JOB1... |
| 09-Sep-2017 17:30:46 | Failing task since 1 failing test cases were found. |
| 09-Sep-2017 17:30:46 | Finished task 'test results' with result: Failed |
| 09-Sep-2017 17:30:46 | Running post build plugin 'Docker Container Cleanup' |
| 09-Sep-2017 17:30:46 | Running post build plugin 'NCover Results Collector' |
| 09-Sep-2017 17:30:46 | Running post build plugin 'Clover Results Collector' |
| 09-Sep-2017 17:30:46 | Running post build plugin 'npm Cache Cleanup' |
| 09-Sep-2017 17:30:46 | Running post build plugin 'Artifact Copier' |
| 09-Sep-2017 17:30:46 | Finalising the build... |
| 09-Sep-2017 17:30:46 | Stopping timer. |
| 09-Sep-2017 17:30:46 | Build CATS-PYC248-JOB1-2 completed. |
| 09-Sep-2017 17:30:46 | Running on server: post build plugin 'NCover Results Collector' |
| 09-Sep-2017 17:30:46 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 09-Sep-2017 17:30:46 | Running on server: post build plugin 'Clover Delta Calculator' |
| 09-Sep-2017 17:30:46 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 09-Sep-2017 17:30:46 | All post build plugins have finished |
| 09-Sep-2017 17:30:46 | Generating build results summary... |
| 09-Sep-2017 17:30:46 | Saving build results to disk... |
| 09-Sep-2017 17:30:46 | Logging substituted variables... |
| 09-Sep-2017 17:30:46 | Indexing build results... |
| 09-Sep-2017 17:30:46 | Finished building CATS-PYC248-JOB1-2. |