Next Generation of pyClowder
Build: #19 failed
Job: Default Job failed
Build log
The build generated 134 lines of output. Download or view full build log.
| 22-May-2019 13:46:09 | Build Clowder - pyclowder2 - clowder-clients-clean - Default Job #19 (CATS-PYC267-JOB1-19) started building on agent buildserver-3.os.ncsa.edu |
| 22-May-2019 13:46:09 | Remote agent on host buildserver-3.os.ncsa.edu |
| 22-May-2019 13:46:09 | Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 |
| 22-May-2019 13:46:09 | Executing build Clowder - pyclowder2 - clowder-clients-clean - Default Job #19 (CATS-PYC267-JOB1-19) |
| 22-May-2019 13:46:09 | Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout' |
| 22-May-2019 13:46:09 | Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 |
| 22-May-2019 13:46:09 | Updating source code to revision: 44a25ac14e21f81c56eea5a8eaff43dbba852ab8 |
| 22-May-2019 13:46:09 | Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/.git'. |
| 22-May-2019 13:46:09 | Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/.git/ |
| 22-May-2019 13:46:09 | Fetching 'refs/heads/clowder-clients-clean' from 'ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git'. Will try to do a shallow fetch. |
| 22-May-2019 13:46:10 | Warning: Permanently added '[127.0.0.1]:45810' (RSA) to the list of known hosts. |
| 22-May-2019 13:46:10 | From ssh://127.0.0.1:45810/cats/pyclowder2 |
| 22-May-2019 13:46:10 | * [new branch] clowder-clients-clean -> clowder-clients-clean |
| 22-May-2019 13:46:10 | Checking out revision 44a25ac14e21f81c56eea5a8eaff43dbba852ab8. |
| 22-May-2019 13:46:10 | Switched to branch 'clowder-clients-clean' |
| 22-May-2019 13:46:10 | Updated source code to revision: 44a25ac14e21f81c56eea5a8eaff43dbba852ab8 |
| 22-May-2019 13:46:10 | Finished task 'Checkout Default Repository' with result: Success |
| 22-May-2019 13:46:10 | Running pre-build action: VCS Version Collector |
| 22-May-2019 13:46:10 | Starting task 'python 2 - pytest' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' |
| 22-May-2019 13:46:10 | Beginning to execute external process for build 'Clowder - pyclowder2 - clowder-clients-clean - Default Job #19 (CATS-PYC267-JOB1-19)' ... running command line: /home/bamboo/bamboo-agent-home/temp/CATS-PYC267-JOB1-19-ScriptBuildTask-1426956841797595978.sh ... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 ... using extra environment variables: bamboo_planRepository_1_branch=clowder-clients-clean bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster bamboo_repository_157745170_git_branch=clowder-clients-clean bamboo_planRepository_1_branchDisplayName=clowder-clients-clean bamboo_repository_revision_number=44a25ac14e21f81c56eea5a8eaff43dbba852ab8 bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC267-JOB1-19 bamboo_repository_157745170_revision_number=44a25ac14e21f81c56eea5a8eaff43dbba852ab8 bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1 bamboo_planRepository_1_name=pyclowder2 bamboo_buildKey=CATS-PYC267-JOB1 bamboo_capability_system_os=linux bamboo_shortPlanName=clowder-clients-clean bamboo_planRepository_name=pyclowder2 bamboo_buildNumber=19 bamboo_capability_system_builder_node_grunt_6=/home/bamboo/node-v6.9.1/bin/grunt bamboo_repository_157745170_name=pyclowder2 bamboo_shortJobName=Default Job bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/CATS-PYC267-JOB1-19 bamboo_repository_157745170_previous_revision_number=2534ae36c3926e6d03f6f80cad698a3f3fa7792f bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/cats/pyclowder2.git bamboo_agentId=143032321 bamboo_planName=Clowder - 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| 22-May-2019 13:46:10 | New python executable in /tmp/virtualenv/pyclowder2-p2/bin/python2 |
| 22-May-2019 13:46:10 | Also creating executable in /tmp/virtualenv/pyclowder2-p2/bin/python |
| 22-May-2019 13:46:12 | Installing setuptools, pkg_resources, pip, wheel...done. |
| 22-May-2019 13:46:12 | Running virtualenv with interpreter /usr/bin/python2 |
| 22-May-2019 13:46:13 | DEPRECATION: Python 2.7 will reach the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 won't be maintained after that date. A future version of pip will drop support for Python 2.7. |
| 22-May-2019 13:46:13 | Collecting enum34==1.1.6 (from -r requirements.txt (line 1)) |
| 22-May-2019 13:46:13 | Using cached https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl |
| 22-May-2019 13:46:13 | Collecting pika==1.0.0 (from -r requirements.txt (line 2)) |
| 22-May-2019 13:46:13 | Using cached https://files.pythonhosted.org/packages/53/a4/5aff2293e1cdcf5f77447ebdfeaac99b622aef7d1e723cf9a5fe317b077c/pika-1.0.0-py2.py3-none-any.whl |
| 22-May-2019 13:46:13 | Collecting PyYAML==5.1 (from -r requirements.txt (line 3)) |
| 22-May-2019 13:46:13 | Collecting requests==2.21.0 (from -r requirements.txt (line 4)) |
| 22-May-2019 13:46:13 | Using cached https://files.pythonhosted.org/packages/7d/e3/20f3d364d6c8e5d2353c72a67778eb189176f08e873c9900e10c0287b84b/requests-2.21.0-py2.py3-none-any.whl |
| 22-May-2019 13:46:13 | Collecting wheel==0.33.1 (from -r requirements.txt (line 5)) |
| 22-May-2019 13:46:13 | Using cached https://files.pythonhosted.org/packages/96/ba/a4702cbb6a3a485239fbe9525443446203f00771af9ac000fa3ef2788201/wheel-0.33.1-py2.py3-none-any.whl |
| 22-May-2019 13:46:13 | Collecting urllib3==1.24.1 (from -r requirements.txt (line 6)) |
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| 22-May-2019 13:46:13 | Collecting pytest==4.3.1 (from -r requirements.txt (line 7)) |
| 22-May-2019 13:46:14 | Using cached https://files.pythonhosted.org/packages/c8/52/c455e718f19e4fd7126c81b4910ca2431ded6c28b97e36a1a1f5e5ef7247/pytest-4.3.1-py2.py3-none-any.whl |
| 22-May-2019 13:46:14 | Collecting pytest-pep8==1.0.6 (from -r requirements.txt (line 8)) |
| 22-May-2019 13:46:14 | Collecting certifi>=2017.4.17 (from requests==2.21.0->-r requirements.txt (line 4)) |
| 22-May-2019 13:46:14 | Using cached https://files.pythonhosted.org/packages/60/75/f692a584e85b7eaba0e03827b3d51f45f571c2e793dd731e598828d380aa/certifi-2019.3.9-py2.py3-none-any.whl |
| 22-May-2019 13:46:14 | Collecting chardet<3.1.0,>=3.0.2 (from requests==2.21.0->-r requirements.txt (line 4)) |
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| 22-May-2019 13:46:14 | Collecting idna<2.9,>=2.5 (from requests==2.21.0->-r requirements.txt (line 4)) |
| 22-May-2019 13:46:14 | Using cached https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl |
| 22-May-2019 13:46:14 | Collecting atomicwrites>=1.0 (from pytest==4.3.1->-r requirements.txt (line 7)) |
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| 22-May-2019 13:46:14 | Collecting py>=1.5.0 (from pytest==4.3.1->-r requirements.txt (line 7)) |
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| 22-May-2019 13:46:14 | Requirement already satisfied: setuptools in /tmp/virtualenv/pyclowder2-p2/lib/python2.7/site-packages (from pytest==4.3.1->-r requirements.txt (line 7)) (41.0.1) |
| 22-May-2019 13:46:14 | Collecting six>=1.10.0 (from pytest==4.3.1->-r requirements.txt (line 7)) |
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| 22-May-2019 13:46:14 | Collecting pathlib2>=2.2.0; python_version < "3.6" (from pytest==4.3.1->-r requirements.txt (line 7)) |
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| 22-May-2019 13:46:14 | Collecting pluggy>=0.7 (from pytest==4.3.1->-r requirements.txt (line 7)) |
| 22-May-2019 13:46:14 | Downloading https://files.pythonhosted.org/packages/cc/e4/2003a5e4e445424602c8f06a436eeed9e78bcae4947128f64741c66c7216/pluggy-0.11.0-py2.py3-none-any.whl |
| 22-May-2019 13:46:14 | Collecting attrs>=17.4.0 (from pytest==4.3.1->-r requirements.txt (line 7)) |
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| 22-May-2019 13:46:14 | Collecting more-itertools<6.0.0,>=4.0.0; python_version <= "2.7" (from pytest==4.3.1->-r requirements.txt (line 7)) |
| 22-May-2019 13:46:14 | Using cached https://files.pythonhosted.org/packages/2f/9d/dcfe59e213093695f108508af1214cf9cd95cc5489e46877ec5cb56369e5/more_itertools-5.0.0-py2-none-any.whl |
| 22-May-2019 13:46:14 | Collecting funcsigs; python_version < "3.0" (from pytest==4.3.1->-r requirements.txt (line 7)) |
| 22-May-2019 13:46:14 | Using cached https://files.pythonhosted.org/packages/69/cb/f5be453359271714c01b9bd06126eaf2e368f1fddfff30818754b5ac2328/funcsigs-1.0.2-py2.py3-none-any.whl |
| 22-May-2019 13:46:14 | Collecting pep8>=1.3 (from pytest-pep8==1.0.6->-r requirements.txt (line 8)) |
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| 22-May-2019 13:46:14 | Collecting pytest-cache (from pytest-pep8==1.0.6->-r requirements.txt (line 8)) |
| 22-May-2019 13:46:14 | Collecting scandir; python_version < "3.5" (from pathlib2>=2.2.0; python_version < "3.6"->pytest==4.3.1->-r requirements.txt (line 7)) |
| 22-May-2019 13:46:14 | Collecting execnet>=1.1.dev1 (from pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 8)) |
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| 22-May-2019 13:46:14 | Collecting apipkg>=1.4 (from execnet>=1.1.dev1->pytest-cache->pytest-pep8==1.0.6->-r requirements.txt (line 8)) |
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| 22-May-2019 13:46:15 | Installing collected packages: enum34, pika, PyYAML, certifi, chardet, idna, urllib3, requests, wheel, atomicwrites, py, six, scandir, pathlib2, pluggy, attrs, more-itertools, funcsigs, pytest, pep8, apipkg, execnet, pytest-cache, pytest-pep8 |
| 22-May-2019 13:46:15 | Found existing installation: wheel 0.33.4 |
| 22-May-2019 13:46:15 | Uninstalling wheel-0.33.4: |
| 22-May-2019 13:46:15 | Successfully uninstalled wheel-0.33.4 |
| 22-May-2019 13:46:15 | Successfully installed PyYAML-5.1 apipkg-1.5 atomicwrites-1.3.0 attrs-19.1.0 certifi-2019.3.9 chardet-3.0.4 enum34-1.1.6 execnet-1.6.0 funcsigs-1.0.2 idna-2.8 more-itertools-5.0.0 pathlib2-2.3.3 pep8-1.7.1 pika-1.0.0 pluggy-0.11.0 py-1.8.0 pytest-4.3.1 pytest-cache-1.0 pytest-pep8-1.0.6 requests-2.21.0 scandir-1.10.0 six-1.12.0 urllib3-1.24.1 wheel-0.33.1 |
| 22-May-2019 13:46:16 | ============================= test session starts ============================== |
| 22-May-2019 13:46:16 | platform linux2 -- Python 2.7.12, pytest-4.3.1, py-1.8.0, pluggy-0.11.0 |
| 22-May-2019 13:46:16 | rootdir: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1, inifile: setup.cfg |
| 22-May-2019 13:46:16 | plugins: pep8-1.0.6 |
| 22-May-2019 13:46:16 | collected 20 items |
| 22-May-2019 13:46:16 | |
| 22-May-2019 13:46:16 | setup.py . |
| 22-May-2019 13:46:16 | contrib/monitor/monitor.py . |
| 22-May-2019 13:46:16 | docs/source/conf.py . |
| 22-May-2019 13:46:16 | pyclowder/__init__.py . |
| 22-May-2019 13:46:16 | pyclowder/client.py . |
| 22-May-2019 13:46:16 | pyclowder/collections.py . |
| 22-May-2019 13:46:16 | pyclowder/connectors.py . |
| 22-May-2019 13:46:16 | pyclowder/datasets.py . |
| 22-May-2019 13:46:16 | pyclowder/extractors.py . |
| 22-May-2019 13:46:16 | pyclowder/files.py F |
| 22-May-2019 13:46:16 | pyclowder/geostreams.py . |
| 22-May-2019 13:46:16 | pyclowder/sections.py . |
| 22-May-2019 13:46:16 | pyclowder/utils.py . |
| 22-May-2019 13:46:17 | sample-extractors/binary-preview/binary_extractor.py . |
| 22-May-2019 13:46:17 | sample-extractors/echo/echo.py . |
| 22-May-2019 13:46:17 | sample-extractors/simple-extractor/simple_extractor.py . |
| 22-May-2019 13:46:17 | sample-extractors/simple-r-extractor/r_extractor.py . |
| 22-May-2019 13:46:17 | sample-extractors/wordcount/wordcount.py . |
| 22-May-2019 13:46:17 | sample-extractors/wordcount-simple-extractor/wordcount.py . |
| 22-May-2019 13:46:17 | tests/clientTest.py . |
| 22-May-2019 13:46:17 | |
| 22-May-2019 13:46:17 | =================================== FAILURES =================================== |
| 22-May-2019 13:46:17 | __________________________________ PEP8-check __________________________________ |
| 22-May-2019 13:46:17 | /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/pyclowder/files.py:32:1: E302 expected 2 blank lines, found 1 |
| 22-May-2019 13:46:17 | class FilesApi(object): |
| 22-May-2019 13:46:17 | ^ |
| 22-May-2019 13:46:17 | |
| 22-May-2019 13:46:17 | - generated xml file: /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1/test-reports/results-p2.xml - |
| 22-May-2019 13:46:17 | ===================== 1 failed, 19 passed in 0.42 seconds ====================== |
| 22-May-2019 13:46:17 | Failing task since return code of [/home/bamboo/bamboo-agent-home/temp/CATS-PYC267-JOB1-19-ScriptBuildTask-1426956841797595978.sh] was 1 while expected 0 |
| 22-May-2019 13:46:17 | Finished task 'python 2 - pytest' with result: Failed |
| 22-May-2019 13:46:17 | Starting task 'test results' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit' |
| 22-May-2019 13:46:17 | Parsing test results under /home/bamboo/bamboo-agent-home/xml-data/build-dir/CATS-PYC267-JOB1... |
| 22-May-2019 13:46:17 | Failing task since 1 failing test cases were found. |
| 22-May-2019 13:46:17 | Finished task 'test results' with result: Failed |
| 22-May-2019 13:46:17 | Running post build plugin 'Docker Container Cleanup' |
| 22-May-2019 13:46:17 | Running post build plugin 'NCover Results Collector' |
| 22-May-2019 13:46:17 | Running post build plugin 'Clover Results Collector' |
| 22-May-2019 13:46:17 | Running post build plugin 'npm Cache Cleanup' |
| 22-May-2019 13:46:17 | Running post build plugin 'Artifact Copier' |
| 22-May-2019 13:46:17 | Finalising the build... |
| 22-May-2019 13:46:17 | Stopping timer. |
| 22-May-2019 13:46:17 | Build CATS-PYC267-JOB1-19 completed. |
| 22-May-2019 13:46:17 | Running on server: post build plugin 'NCover Results Collector' |
| 22-May-2019 13:46:17 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 22-May-2019 13:46:17 | Running on server: post build plugin 'Clover Delta Calculator' |
| 22-May-2019 13:46:17 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 22-May-2019 13:46:17 | All post build plugins have finished |
| 22-May-2019 13:46:17 | Generating build results summary... |
| 22-May-2019 13:46:17 | Saving build results to disk... |
| 22-May-2019 13:46:17 | Logging substituted variables... |
| 22-May-2019 13:46:17 | Indexing build results... |
| 22-May-2019 13:46:17 | Finished building CATS-PYC267-JOB1-19. |