Build: #2 was successful
Job: Default Job was successful
Build log
The build generated 33,617 lines of output. The output is too long and has been truncated to the last 1,000 lines. Download or view full build log.
| 06-Mar-2017 11:10:14 | checking whether to build shared libraries... yes |
| 06-Mar-2017 11:10:14 | checking whether to build static libraries... yes |
| 06-Mar-2017 11:10:14 | checking how to run the C++ preprocessor... g++ -E |
| 06-Mar-2017 11:10:14 | checking for ld used by g++... /usr/bin/ld -m elf_x86_64 |
| 06-Mar-2017 11:10:14 | checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes |
| 06-Mar-2017 11:10:14 | checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes |
| 06-Mar-2017 11:10:14 | checking for g++ option to produce PIC... -fPIC -DPIC |
| 06-Mar-2017 11:10:14 | checking if g++ PIC flag -fPIC -DPIC works... yes |
| 06-Mar-2017 11:10:15 | checking if g++ static flag -static works... yes |
| 06-Mar-2017 11:10:15 | checking if g++ supports -c -o file.o... yes |
| 06-Mar-2017 11:10:15 | checking if g++ supports -c -o file.o... (cached) yes |
| 06-Mar-2017 11:10:15 | checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes |
| 06-Mar-2017 11:10:15 | checking dynamic linker characteristics... (cached) GNU/Linux ld.so |
| 06-Mar-2017 11:10:15 | checking how to hardcode library paths into programs... immediate |
| 06-Mar-2017 11:10:15 | checking whether to enable maintainer-specific portions of Makefiles... no |
| 06-Mar-2017 11:10:15 | checking for working memcmp... yes |
| 06-Mar-2017 11:10:15 | checking whether lstat correctly handles trailing slash... yes |
| 06-Mar-2017 11:10:15 | checking whether stat accepts an empty string... no |
| 06-Mar-2017 11:10:15 | checking for working strtod... yes |
| 06-Mar-2017 11:10:15 | checking for canonicalize_file_name... yes |
| 06-Mar-2017 11:10:15 | checking for floor... no |
| 06-Mar-2017 11:10:15 | checking for gethostname... yes |
| 06-Mar-2017 11:10:16 | checking for getpagesize... yes |
| 06-Mar-2017 11:10:16 | checking for getrusage... yes |
| 06-Mar-2017 11:10:16 | checking for memchr... yes |
| 06-Mar-2017 11:10:16 | checking for memmove... yes |
| 06-Mar-2017 11:10:16 | checking for memset... yes |
| 06-Mar-2017 11:10:16 | checking for mkstemp... yes |
| 06-Mar-2017 11:10:16 | checking for pow... no |
| 06-Mar-2017 11:10:16 | checking for readlink... yes |
| 06-Mar-2017 11:10:16 | checking for realpath... yes |
| 06-Mar-2017 11:10:16 | checking for regcomp... yes |
| 06-Mar-2017 11:10:17 | checking for setlocale... yes |
| 06-Mar-2017 11:10:17 | checking for sqrt... no |
| 06-Mar-2017 11:10:17 | checking for strchr... yes |
| 06-Mar-2017 11:10:17 | checking for strerror... yes |
| 06-Mar-2017 11:10:17 | checking for strpbrk... yes |
| 06-Mar-2017 11:10:17 | checking for strrchr... yes |
| 06-Mar-2017 11:10:17 | checking for strstr... yes |
| 06-Mar-2017 11:10:17 | checking for strtol... yes |
| 06-Mar-2017 11:10:17 | checking for ANSI C header files... (cached) yes |
| 06-Mar-2017 11:10:17 | checking getopt.h usability... yes |
| 06-Mar-2017 11:10:17 | checking getopt.h presence... yes |
| 06-Mar-2017 11:10:17 | checking for getopt.h... yes |
| 06-Mar-2017 11:10:17 | checking libintl.h usability... yes |
| 06-Mar-2017 11:10:17 | checking libintl.h presence... yes |
| 06-Mar-2017 11:10:17 | checking for libintl.h... yes |
| 06-Mar-2017 11:10:18 | checking limits.h usability... yes |
| 06-Mar-2017 11:10:18 | checking limits.h presence... yes |
| 06-Mar-2017 11:10:18 | checking for limits.h... yes |
| 06-Mar-2017 11:10:18 | checking locale.h usability... yes |
| 06-Mar-2017 11:10:18 | checking locale.h presence... yes |
| 06-Mar-2017 11:10:18 | checking for locale.h... yes |
| 06-Mar-2017 11:10:18 | checking netinet/in.h usability... yes |
| 06-Mar-2017 11:10:18 | checking netinet/in.h presence... yes |
| 06-Mar-2017 11:10:18 | checking for netinet/in.h... yes |
| 06-Mar-2017 11:10:18 | checking for stdlib.h... (cached) yes |
| 06-Mar-2017 11:10:18 | checking for string.h... (cached) yes |
| 06-Mar-2017 11:10:18 | checking for strings.h... (cached) yes |
| 06-Mar-2017 11:10:18 | checking for unistd.h... (cached) yes |
| 06-Mar-2017 11:10:18 | checking cstdlib usability... yes |
| 06-Mar-2017 11:10:18 | checking cstdlib presence... yes |
| 06-Mar-2017 11:10:18 | checking for cstdlib... yes |
| 06-Mar-2017 11:10:18 | checking for an ANSI C-conforming const... yes |
| 06-Mar-2017 11:10:18 | checking for inline... inline |
| 06-Mar-2017 11:10:18 | checking for pid_t... yes |
| 06-Mar-2017 11:10:18 | checking for size_t... yes |
| 06-Mar-2017 11:10:19 | checking whether struct tm is in sys/time.h or time.h... time.h |
| 06-Mar-2017 11:10:19 | checking for uid_t in sys/types.h... yes |
| 06-Mar-2017 11:10:19 | checking for ptrdiff_t... yes |
| 06-Mar-2017 11:10:19 | checking size of int*... 8 |
| 06-Mar-2017 11:10:19 | checking whether C++ compiler implements namespaces... yes |
| 06-Mar-2017 11:10:19 | checking whether C++ compiler has working valarray<T>... yes |
| 06-Mar-2017 11:10:19 | checking for special C compiler options needed for large files... no |
| 06-Mar-2017 11:10:19 | checking for _FILE_OFFSET_BITS value needed for large files... no |
| 06-Mar-2017 11:10:19 | ################################# |
| 06-Mar-2017 11:10:19 | # Test for netCDF # |
| 06-Mar-2017 11:10:19 | ################################ |
| 06-Mar-2017 11:10:19 | checking for /opt/local/include/netcdf.h... no |
| 06-Mar-2017 11:10:19 | checking for /opt/local/lib/libnetcdf.a... no |
| 06-Mar-2017 11:10:19 | checking netcdf.h usability... yes |
| 06-Mar-2017 11:10:19 | checking netcdf.h presence... yes |
| 06-Mar-2017 11:10:19 | checking for netcdf.h... yes |
| 06-Mar-2017 11:10:20 | checking for nc_open in -lnetcdf... yes |
| 06-Mar-2017 11:10:20 | ################################# |
| 06-Mar-2017 11:10:20 | # Test for netCDF4 support # |
| 06-Mar-2017 11:10:20 | ################################# |
| 06-Mar-2017 11:10:20 | checking whether NC_CHUNKED is declared... yes |
| 06-Mar-2017 11:10:20 | configure: netcdf.h contains netCDF4 definitions |
| 06-Mar-2017 11:10:20 | checking for nc_def_var_chunking in -lnetcdf... yes |
| 06-Mar-2017 11:10:20 | configure: Good news: Simple program compiles and links to netCDF4 library |
| 06-Mar-2017 11:10:20 | checking for gcc -std=gnu99 option to support OpenMP... -fopenmp |
| 06-Mar-2017 11:10:20 | configure: OpenMP support enabled |
| 06-Mar-2017 11:10:20 | Beginning generic tests for DAP support |
| 06-Mar-2017 11:10:20 | Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... |
| 06-Mar-2017 11:10:20 | checking for daperror in -lnetcdf... no |
| 06-Mar-2017 11:10:20 | configure: WARNING: DAP-netCDF support through libnetcdf.a disabled (missing DAP functions) |
| 06-Mar-2017 11:10:20 | checking for getopt_long... yes |
| 06-Mar-2017 11:10:20 | checking for _g95_ac_array in -lf95... no |
| 06-Mar-2017 11:10:20 | checking for sin in -lm... yes |
| 06-Mar-2017 11:10:20 | checking for sinf in -lsunmath... no |
| 06-Mar-2017 11:10:20 | checking for gettext in -lintl... no |
| 06-Mar-2017 11:10:21 | checking for res_init in -lresolv... no |
| 06-Mar-2017 11:10:21 | checking for main in -lsocket... no |
| 06-Mar-2017 11:10:21 | checking for main in -lthread... no |
| 06-Mar-2017 11:10:21 | checking for nco_open in -lnco... no |
| 06-Mar-2017 11:10:21 | checking for nc_inq_format... yes |
| 06-Mar-2017 11:10:21 | checking for getopt... yes |
| 06-Mar-2017 11:10:21 | checking for getopt_long... (cached) yes |
| 06-Mar-2017 11:10:21 | checking for atan2... yes |
| 06-Mar-2017 11:10:21 | checking for acosf... yes |
| 06-Mar-2017 11:10:21 | checking for asinf... yes |
| 06-Mar-2017 11:10:21 | checking for atanf... yes |
| 06-Mar-2017 11:10:21 | checking for atan2f... yes |
| 06-Mar-2017 11:10:22 | checking for cosf... yes |
| 06-Mar-2017 11:10:22 | checking for expf... yes |
| 06-Mar-2017 11:10:22 | checking for fabsf... yes |
| 06-Mar-2017 11:10:22 | checking for fmodf... yes |
| 06-Mar-2017 11:10:22 | checking for log10f... yes |
| 06-Mar-2017 11:10:22 | checking for logf... yes |
| 06-Mar-2017 11:10:22 | checking for powf... yes |
| 06-Mar-2017 11:10:22 | checking for sinf... yes |
| 06-Mar-2017 11:10:22 | checking for sqrtf... yes |
| 06-Mar-2017 11:10:23 | checking for tanf... yes |
| 06-Mar-2017 11:10:23 | checking for erff... yes |
| 06-Mar-2017 11:10:23 | checking for erfcf... yes |
| 06-Mar-2017 11:10:23 | checking for gammaf... yes |
| 06-Mar-2017 11:10:23 | checking for acoshf... yes |
| 06-Mar-2017 11:10:23 | checking for asinhf... yes |
| 06-Mar-2017 11:10:23 | checking for atanhf... yes |
| 06-Mar-2017 11:10:23 | checking for coshf... yes |
| 06-Mar-2017 11:10:23 | checking for sinhf... yes |
| 06-Mar-2017 11:10:24 | checking for tanhf... yes |
| 06-Mar-2017 11:10:24 | checking for ceilf... yes |
| 06-Mar-2017 11:10:24 | checking for floorf... yes |
| 06-Mar-2017 11:10:24 | checking for nearbyint... yes |
| 06-Mar-2017 11:10:24 | checking for rint... yes |
| 06-Mar-2017 11:10:24 | checking for round... yes |
| 06-Mar-2017 11:10:24 | checking for trunc... yes |
| 06-Mar-2017 11:10:24 | checking for nearbyintf... yes |
| 06-Mar-2017 11:10:24 | checking for rintf... yes |
| 06-Mar-2017 11:10:25 | checking for roundf... yes |
| 06-Mar-2017 11:10:25 | checking for truncf... yes |
| 06-Mar-2017 11:10:25 | checking for getopt_long... (cached) yes |
| 06-Mar-2017 11:10:25 | checking for strdup... yes |
| 06-Mar-2017 11:10:25 | checking for strcasecmp... yes |
| 06-Mar-2017 11:10:25 | checking for strcasestr... yes |
| 06-Mar-2017 11:10:25 | ########################################################## |
| 06-Mar-2017 11:10:25 | # Sorting out MacOSX build parameters # |
| 06-Mar-2017 11:10:25 | ########################################################## |
| 06-Mar-2017 11:10:25 | ################################# |
| 06-Mar-2017 11:10:25 | # Testing for ANTLR support # |
| 06-Mar-2017 11:10:25 | ################################# |
| 06-Mar-2017 11:10:25 | checking for runantlr... runantlr |
| 06-Mar-2017 11:10:25 | configure: antlr library was found |
| 06-Mar-2017 11:10:25 | ################################################## |
| 06-Mar-2017 11:10:25 | # Testing for ESMF support (only for developers) # |
| 06-Mar-2017 11:10:25 | ################################################## |
| 06-Mar-2017 11:10:25 | ######################################## |
| 06-Mar-2017 11:10:25 | # Testing for GSL support # |
| 06-Mar-2017 11:10:25 | ######################################## |
| 06-Mar-2017 11:10:25 | configure: WARNING: Did not find 'gsl-config' command in your default path |
| 06-Mar-2017 11:10:25 | checking regex.h usability... yes |
| 06-Mar-2017 11:10:25 | checking regex.h presence... yes |
| 06-Mar-2017 11:10:25 | checking for regex.h... yes |
| 06-Mar-2017 11:10:25 | checking for sys/types.h... (cached) yes |
| 06-Mar-2017 11:10:25 | checking for regexec... yes |
| 06-Mar-2017 11:10:25 | checking for regcomp... (cached) yes |
| 06-Mar-2017 11:10:25 | checking for regfree... yes |
| 06-Mar-2017 11:10:25 | ######################################## |
| 06-Mar-2017 11:10:25 | # Testing for UDUNITS support # |
| 06-Mar-2017 11:10:25 | ######################################## |
| 06-Mar-2017 11:10:25 | WARNING: Requested both UDUnits and UDUnits2 support---overriding UDUnits |
| 06-Mar-2017 11:10:25 | Will attempt to build NCO with UDUnits support from libudunits2, not from libudunits |
| 06-Mar-2017 11:10:25 | checking for XML_ParserCreate in -lexpat... yes |
| 06-Mar-2017 11:10:25 | checking for /usr/include/udunits2/udunits2.h... no |
| 06-Mar-2017 11:10:25 | checking for /usr/include/udunits2.h... yes |
| 06-Mar-2017 11:10:25 | checking for /usr/lib/x86_64-linux-gnu/libudunits2.a... yes |
| 06-Mar-2017 11:10:25 | checking for /usr/lib/i386-linux-gnu/libudunits2.a... no |
| 06-Mar-2017 11:10:25 | checking for /opt/local/include/udunits2/udunits2.h... no |
| 06-Mar-2017 11:10:25 | checking for /opt/local/lib/libudunits2.a... no |
| 06-Mar-2017 11:10:25 | checking for ... no |
| 06-Mar-2017 11:10:25 | configure: WARNING: file was not found but will still attempt to build NCO with UDUnits2 support. |
| 06-Mar-2017 11:10:25 | configure: NB: Following tests of UDUnits2 library and header must succeed for UDUnits2 support: |
| 06-Mar-2017 11:10:26 | checking for ut_read_xml in -ludunits2... yes |
| 06-Mar-2017 11:10:26 | checking udunits2.h usability... yes |
| 06-Mar-2017 11:10:26 | checking udunits2.h presence... yes |
| 06-Mar-2017 11:10:26 | checking for udunits2.h... yes |
| 06-Mar-2017 11:10:26 | configure: UDUnits2 support enabled |
| 06-Mar-2017 11:10:26 | checking for ncgen... /srv/sw/netcdf-4.4.1/bin/ncgen |
| 06-Mar-2017 11:10:26 | configure: Creating sample netCDF data files for self-tests |
| 06-Mar-2017 11:10:26 | ############################### |
| 06-Mar-2017 11:10:26 | # Require Shared Libs? # |
| 06-Mar-2017 11:10:26 | ############################### |
| 06-Mar-2017 11:10:26 | checking for makeinfo... no |
| 06-Mar-2017 11:10:26 | checking that generated files are newer than configure... done |
| 06-Mar-2017 11:10:26 | configure: creating ./config.status |
| 06-Mar-2017 11:10:27 | config.status: creating Makefile |
| 06-Mar-2017 11:10:27 | config.status: creating data/Makefile |
| 06-Mar-2017 11:10:27 | config.status: creating src/Makefile |
| 06-Mar-2017 11:10:27 | config.status: creating src/nco/Makefile |
| 06-Mar-2017 11:10:27 | config.status: creating man/Makefile |
| 06-Mar-2017 11:10:28 | config.status: creating src/nco_c++/Makefile |
| 06-Mar-2017 11:10:28 | config.status: creating src/nco++/Makefile |
| 06-Mar-2017 11:10:28 | config.status: creating config.h |
| 06-Mar-2017 11:10:28 | config.status: executing depfiles commands |
| 06-Mar-2017 11:10:28 | config.status: executing libtool commands |
| 06-Mar-2017 11:10:28 | |
| 06-Mar-2017 11:10:28 | Configuration Parameters: |
| 06-Mar-2017 11:10:28 | AR_FLAGS............. cru |
| 06-Mar-2017 11:10:28 | CC................... gcc -std=gnu99 |
| 06-Mar-2017 11:10:28 | CFLAGS............... -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE |
| 06-Mar-2017 11:10:28 | CPP.................. gcc -E |
| 06-Mar-2017 11:10:28 | CPPFLAGS............. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include |
| 06-Mar-2017 11:10:28 | CXX.................. g++ |
| 06-Mar-2017 11:10:28 | CXXFLAGS............. -g -O2 |
| 06-Mar-2017 11:10:28 | ENABLE_DAP........... no |
| 06-Mar-2017 11:10:28 | ENABLE_ESMF...........no |
| 06-Mar-2017 11:10:28 | ENABLE_GSL........... no |
| 06-Mar-2017 11:10:28 | ENABLE_NETCDF4....... yes |
| 06-Mar-2017 11:10:28 | ENABLE_OPENMP........ yes |
| 06-Mar-2017 11:10:28 | ENABLE_UDUNITS....... no |
| 06-Mar-2017 11:10:28 | ENABLE_UDUNITS2...... yes |
| 06-Mar-2017 11:10:28 | GSL_ROOT............. |
| 06-Mar-2017 11:10:28 | HAVE_ANTLR........... runantlr |
| 06-Mar-2017 11:10:28 | HAVE_MAKEINFO........ no |
| 06-Mar-2017 11:10:28 | HAVE_NETCDF4_H....... yes |
| 06-Mar-2017 11:10:28 | HOST................. |
| 06-Mar-2017 11:10:28 | HOSTNAME............. 397f80c505a4 |
| 06-Mar-2017 11:10:28 | LDFLAGS.............. -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu |
| 06-Mar-2017 11:10:28 | LIBS................. -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:10:28 | NETCDF_ROOT.......... /srv/sw/netcdf-4.4.1 |
| 06-Mar-2017 11:10:28 | OPENMP_CFLAGS........ -fopenmp |
| 06-Mar-2017 11:10:28 | host................. x86_64-unknown-linux-gnu |
| 06-Mar-2017 11:10:28 | install prefix ...... /srv/sw/nco-4.6.1 |
| 06-Mar-2017 11:10:28 | ******************************************************************* |
| 06-Mar-2017 11:10:28 | Configuration complete. You are now ready to run 'make'. |
| 06-Mar-2017 11:10:28 | Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). |
| 06-Mar-2017 11:10:28 | If the build fails, please examine the file 'configure.eg' |
| 06-Mar-2017 11:10:28 | in the top-level NCO directory. It contains examples known to |
| 06-Mar-2017 11:10:28 | build NCO for various platforms and compilers. |
| 06-Mar-2017 11:10:28 | ******************************************************************* |
| 06-Mar-2017 11:10:28 | make all-recursive |
| 06-Mar-2017 11:10:28 | make[1]: Entering directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:10:28 | Making all in data |
| 06-Mar-2017 11:10:28 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:10:28 | /srv/sw/netcdf-4.4.1/bin/ncgen -o big.nc big.cdl |
| 06-Mar-2017 11:10:28 | /srv/sw/netcdf-4.4.1/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl |
| 06-Mar-2017 11:10:28 | ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc |
| 06-Mar-2017 11:10:28 | /bin/bash: ncks: command not found |
| 06-Mar-2017 11:10:28 | Makefile:562: recipe for target 'in_4c.nc' failed |
| 06-Mar-2017 11:10:28 | make[2]: [in_4c.nc] Error 127 (ignored) |
| 06-Mar-2017 11:10:28 | /srv/sw/netcdf-4.4.1/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl |
| 06-Mar-2017 11:10:28 | /srv/sw/netcdf-4.4.1/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl |
| 06-Mar-2017 11:10:28 | /srv/sw/netcdf-4.4.1/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl |
| 06-Mar-2017 11:10:28 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:10:28 | Making all in src |
| 06-Mar-2017 11:10:28 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:10:28 | Making all in nco |
| 06-Mar-2017 11:10:28 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:10:28 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_att_utl.lo -MD -MP -MF .deps/nco_att_utl.Tpo -c -o nco_att_utl.lo nco_att_utl.c |
| 06-Mar-2017 11:10:28 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_att_utl.lo -MD -MP -MF .deps/nco_att_utl.Tpo -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o |
| 06-Mar-2017 11:10:30 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_att_utl.lo -MD -MP -MF .deps/nco_att_utl.Tpo -c nco_att_utl.c -o nco_att_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:31 | mv -f .deps/nco_att_utl.Tpo .deps/nco_att_utl.Plo |
| 06-Mar-2017 11:10:31 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_aux.lo -MD -MP -MF .deps/nco_aux.Tpo -c -o nco_aux.lo nco_aux.c |
| 06-Mar-2017 11:10:31 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_aux.lo -MD -MP -MF .deps/nco_aux.Tpo -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o |
| 06-Mar-2017 11:10:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_aux.lo -MD -MP -MF .deps/nco_aux.Tpo -c nco_aux.c -o nco_aux.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:32 | mv -f .deps/nco_aux.Tpo .deps/nco_aux.Plo |
| 06-Mar-2017 11:10:32 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_bnr.lo -MD -MP -MF .deps/nco_bnr.Tpo -c -o nco_bnr.lo nco_bnr.c |
| 06-Mar-2017 11:10:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_bnr.lo -MD -MP -MF .deps/nco_bnr.Tpo -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o |
| 06-Mar-2017 11:10:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_bnr.lo -MD -MP -MF .deps/nco_bnr.Tpo -c nco_bnr.c -o nco_bnr.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:33 | mv -f .deps/nco_bnr.Tpo .deps/nco_bnr.Plo |
| 06-Mar-2017 11:10:33 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cln_utl.lo -MD -MP -MF .deps/nco_cln_utl.Tpo -c -o nco_cln_utl.lo nco_cln_utl.c |
| 06-Mar-2017 11:10:33 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cln_utl.lo -MD -MP -MF .deps/nco_cln_utl.Tpo -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o |
| 06-Mar-2017 11:10:33 | nco_cln_utl.c: In function 'nco_cln_clc_org': |
| 06-Mar-2017 11:10:33 | nco_cln_utl.c:683:3: warning: implicit declaration of function 'strcasestr' [-Wimplicit-function-declaration] |
| 06-Mar-2017 11:10:33 | if(strcasestr(fl_bs_sng," from ") || strcasestr(fl_bs_sng," since ") || strcasestr(fl_bs_sng," after ")){ |
| 06-Mar-2017 11:10:33 | ^ |
| 06-Mar-2017 11:10:33 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cln_utl.lo -MD -MP -MF .deps/nco_cln_utl.Tpo -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:34 | mv -f .deps/nco_cln_utl.Tpo .deps/nco_cln_utl.Plo |
| 06-Mar-2017 11:10:34 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_dmn.lo -MD -MP -MF .deps/nco_cnf_dmn.Tpo -c -o nco_cnf_dmn.lo nco_cnf_dmn.c |
| 06-Mar-2017 11:10:34 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_dmn.lo -MD -MP -MF .deps/nco_cnf_dmn.Tpo -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o |
| 06-Mar-2017 11:10:34 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_dmn.lo -MD -MP -MF .deps/nco_cnf_dmn.Tpo -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:35 | mv -f .deps/nco_cnf_dmn.Tpo .deps/nco_cnf_dmn.Plo |
| 06-Mar-2017 11:10:35 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_typ.lo -MD -MP -MF .deps/nco_cnf_typ.Tpo -c -o nco_cnf_typ.lo nco_cnf_typ.c |
| 06-Mar-2017 11:10:35 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_typ.lo -MD -MP -MF .deps/nco_cnf_typ.Tpo -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o |
| 06-Mar-2017 11:10:36 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnf_typ.lo -MD -MP -MF .deps/nco_cnf_typ.Tpo -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:37 | mv -f .deps/nco_cnf_typ.Tpo .deps/nco_cnf_typ.Plo |
| 06-Mar-2017 11:10:37 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnk.lo -MD -MP -MF .deps/nco_cnk.Tpo -c -o nco_cnk.lo nco_cnk.c |
| 06-Mar-2017 11:10:37 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnk.lo -MD -MP -MF .deps/nco_cnk.Tpo -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o |
| 06-Mar-2017 11:10:38 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnk.lo -MD -MP -MF .deps/nco_cnk.Tpo -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:39 | mv -f .deps/nco_cnk.Tpo .deps/nco_cnk.Plo |
| 06-Mar-2017 11:10:39 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_arm.lo -MD -MP -MF .deps/nco_cnv_arm.Tpo -c -o nco_cnv_arm.lo nco_cnv_arm.c |
| 06-Mar-2017 11:10:39 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_arm.lo -MD -MP -MF .deps/nco_cnv_arm.Tpo -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o |
| 06-Mar-2017 11:10:39 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_arm.lo -MD -MP -MF .deps/nco_cnv_arm.Tpo -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:40 | mv -f .deps/nco_cnv_arm.Tpo .deps/nco_cnv_arm.Plo |
| 06-Mar-2017 11:10:40 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_csm.lo -MD -MP -MF .deps/nco_cnv_csm.Tpo -c -o nco_cnv_csm.lo nco_cnv_csm.c |
| 06-Mar-2017 11:10:40 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_csm.lo -MD -MP -MF .deps/nco_cnv_csm.Tpo -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o |
| 06-Mar-2017 11:10:40 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_cnv_csm.lo -MD -MP -MF .deps/nco_cnv_csm.Tpo -c nco_cnv_csm.c -o nco_cnv_csm.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:41 | mv -f .deps/nco_cnv_csm.Tpo .deps/nco_cnv_csm.Plo |
| 06-Mar-2017 11:10:41 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ctl.lo -MD -MP -MF .deps/nco_ctl.Tpo -c -o nco_ctl.lo nco_ctl.c |
| 06-Mar-2017 11:10:41 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ctl.lo -MD -MP -MF .deps/nco_ctl.Tpo -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o |
| 06-Mar-2017 11:10:41 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ctl.lo -MD -MP -MF .deps/nco_ctl.Tpo -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:42 | mv -f .deps/nco_ctl.Tpo .deps/nco_ctl.Plo |
| 06-Mar-2017 11:10:42 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dbg.lo -MD -MP -MF .deps/nco_dbg.Tpo -c -o nco_dbg.lo nco_dbg.c |
| 06-Mar-2017 11:10:42 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dbg.lo -MD -MP -MF .deps/nco_dbg.Tpo -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o |
| 06-Mar-2017 11:10:42 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dbg.lo -MD -MP -MF .deps/nco_dbg.Tpo -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:42 | mv -f .deps/nco_dbg.Tpo .deps/nco_dbg.Plo |
| 06-Mar-2017 11:10:42 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dmn_utl.lo -MD -MP -MF .deps/nco_dmn_utl.Tpo -c -o nco_dmn_utl.lo nco_dmn_utl.c |
| 06-Mar-2017 11:10:43 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dmn_utl.lo -MD -MP -MF .deps/nco_dmn_utl.Tpo -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o |
| 06-Mar-2017 11:10:43 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_dmn_utl.lo -MD -MP -MF .deps/nco_dmn_utl.Tpo -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:43 | mv -f .deps/nco_dmn_utl.Tpo .deps/nco_dmn_utl.Plo |
| 06-Mar-2017 11:10:43 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_fl_utl.lo -MD -MP -MF .deps/nco_fl_utl.Tpo -c -o nco_fl_utl.lo nco_fl_utl.c |
| 06-Mar-2017 11:10:43 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_fl_utl.lo -MD -MP -MF .deps/nco_fl_utl.Tpo -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o |
| 06-Mar-2017 11:10:44 | nco_fl_utl.c: In function 'nco_create_mode_prs': |
| 06-Mar-2017 11:10:44 | nco_fl_utl.c:62:3: warning: implicit declaration of function 'strcasestr' [-Wimplicit-function-declaration] |
| 06-Mar-2017 11:10:44 | if(strcasestr("classic",fl_fmt_sng) && !strcasestr(fl_fmt_sng,"netcdf4")){ |
| 06-Mar-2017 11:10:44 | ^ |
| 06-Mar-2017 11:10:44 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_fl_utl.lo -MD -MP -MF .deps/nco_fl_utl.Tpo -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:45 | mv -f .deps/nco_fl_utl.Tpo .deps/nco_fl_utl.Plo |
| 06-Mar-2017 11:10:45 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_utl.lo -MD -MP -MF .deps/nco_grp_utl.Tpo -c -o nco_grp_utl.lo nco_grp_utl.c |
| 06-Mar-2017 11:10:45 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_utl.lo -MD -MP -MF .deps/nco_grp_utl.Tpo -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o |
| 06-Mar-2017 11:10:51 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_utl.lo -MD -MP -MF .deps/nco_grp_utl.Tpo -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:56 | mv -f .deps/nco_grp_utl.Tpo .deps/nco_grp_utl.Plo |
| 06-Mar-2017 11:10:56 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_trv.lo -MD -MP -MF .deps/nco_grp_trv.Tpo -c -o nco_grp_trv.lo nco_grp_trv.c |
| 06-Mar-2017 11:10:56 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_trv.lo -MD -MP -MF .deps/nco_grp_trv.Tpo -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o |
| 06-Mar-2017 11:10:57 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_grp_trv.lo -MD -MP -MF .deps/nco_grp_trv.Tpo -c nco_grp_trv.c -o nco_grp_trv.o >/dev/null 2>&1 |
| 06-Mar-2017 11:10:58 | mv -f .deps/nco_grp_trv.Tpo .deps/nco_grp_trv.Plo |
| 06-Mar-2017 11:10:58 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lmt.lo -MD -MP -MF .deps/nco_lmt.Tpo -c -o nco_lmt.lo nco_lmt.c |
| 06-Mar-2017 11:10:58 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lmt.lo -MD -MP -MF .deps/nco_lmt.Tpo -c nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o |
| 06-Mar-2017 11:11:00 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lmt.lo -MD -MP -MF .deps/nco_lmt.Tpo -c nco_lmt.c -o nco_lmt.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:00 | mv -f .deps/nco_lmt.Tpo .deps/nco_lmt.Plo |
| 06-Mar-2017 11:11:00 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lst_utl.lo -MD -MP -MF .deps/nco_lst_utl.Tpo -c -o nco_lst_utl.lo nco_lst_utl.c |
| 06-Mar-2017 11:11:00 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lst_utl.lo -MD -MP -MF .deps/nco_lst_utl.Tpo -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o |
| 06-Mar-2017 11:11:01 | nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst': |
| 06-Mar-2017 11:11:01 | nco_lst_utl.c:38:23: warning: unknown escape sequence: '\.' |
| 06-Mar-2017 11:11:01 | const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ |
| 06-Mar-2017 11:11:01 | ^ |
| 06-Mar-2017 11:11:01 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_lst_utl.lo -MD -MP -MF .deps/nco_lst_utl.Tpo -c nco_lst_utl.c -o nco_lst_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:01 | mv -f .deps/nco_lst_utl.Tpo .deps/nco_lst_utl.Plo |
| 06-Mar-2017 11:11:01 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_md5.lo -MD -MP -MF .deps/nco_md5.Tpo -c -o nco_md5.lo nco_md5.c |
| 06-Mar-2017 11:11:01 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_md5.lo -MD -MP -MF .deps/nco_md5.Tpo -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o |
| 06-Mar-2017 11:11:02 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_md5.lo -MD -MP -MF .deps/nco_md5.Tpo -c nco_md5.c -o nco_md5.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:02 | mv -f .deps/nco_md5.Tpo .deps/nco_md5.Plo |
| 06-Mar-2017 11:11:02 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mmr.lo -MD -MP -MF .deps/nco_mmr.Tpo -c -o nco_mmr.lo nco_mmr.c |
| 06-Mar-2017 11:11:02 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mmr.lo -MD -MP -MF .deps/nco_mmr.Tpo -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o |
| 06-Mar-2017 11:11:03 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mmr.lo -MD -MP -MF .deps/nco_mmr.Tpo -c nco_mmr.c -o nco_mmr.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:03 | mv -f .deps/nco_mmr.Tpo .deps/nco_mmr.Plo |
| 06-Mar-2017 11:11:03 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_msa.lo -MD -MP -MF .deps/nco_msa.Tpo -c -o nco_msa.lo nco_msa.c |
| 06-Mar-2017 11:11:03 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_msa.lo -MD -MP -MF .deps/nco_msa.Tpo -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o |
| 06-Mar-2017 11:11:04 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_msa.lo -MD -MP -MF .deps/nco_msa.Tpo -c nco_msa.c -o nco_msa.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:05 | mv -f .deps/nco_msa.Tpo .deps/nco_msa.Plo |
| 06-Mar-2017 11:11:05 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mss_val.lo -MD -MP -MF .deps/nco_mss_val.Tpo -c -o nco_mss_val.lo nco_mss_val.c |
| 06-Mar-2017 11:11:05 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mss_val.lo -MD -MP -MF .deps/nco_mss_val.Tpo -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o |
| 06-Mar-2017 11:11:05 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_mss_val.lo -MD -MP -MF .deps/nco_mss_val.Tpo -c nco_mss_val.c -o nco_mss_val.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:06 | mv -f .deps/nco_mss_val.Tpo .deps/nco_mss_val.Plo |
| 06-Mar-2017 11:11:06 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_netcdf.lo -MD -MP -MF .deps/nco_netcdf.Tpo -c -o nco_netcdf.lo nco_netcdf.c |
| 06-Mar-2017 11:11:06 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_netcdf.lo -MD -MP -MF .deps/nco_netcdf.Tpo -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o |
| 06-Mar-2017 11:11:06 | nco_netcdf.c: In function 'nco_open_mem': |
| 06-Mar-2017 11:11:06 | nco_netcdf.c:710:3: warning: implicit declaration of function 'nc_open_mem' [-Wimplicit-function-declaration] |
| 06-Mar-2017 11:11:06 | rcd=nc_open_mem(fl_nm,mode,sz,void_ptr,nc_id); |
| 06-Mar-2017 11:11:06 | ^ |
| 06-Mar-2017 11:11:07 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_netcdf.lo -MD -MP -MF .deps/nco_netcdf.Tpo -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:08 | mv -f .deps/nco_netcdf.Tpo .deps/nco_netcdf.Plo |
| 06-Mar-2017 11:11:08 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_omp.lo -MD -MP -MF .deps/nco_omp.Tpo -c -o nco_omp.lo nco_omp.c |
| 06-Mar-2017 11:11:08 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_omp.lo -MD -MP -MF .deps/nco_omp.Tpo -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o |
| 06-Mar-2017 11:11:08 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_omp.lo -MD -MP -MF .deps/nco_omp.Tpo -c nco_omp.c -o nco_omp.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:08 | mv -f .deps/nco_omp.Tpo .deps/nco_omp.Plo |
| 06-Mar-2017 11:11:08 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_pck.lo -MD -MP -MF .deps/nco_pck.Tpo -c -o nco_pck.lo nco_pck.c |
| 06-Mar-2017 11:11:08 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_pck.lo -MD -MP -MF .deps/nco_pck.Tpo -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o |
| 06-Mar-2017 11:11:09 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_pck.lo -MD -MP -MF .deps/nco_pck.Tpo -c nco_pck.c -o nco_pck.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:09 | mv -f .deps/nco_pck.Tpo .deps/nco_pck.Plo |
| 06-Mar-2017 11:11:09 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ppc.lo -MD -MP -MF .deps/nco_ppc.Tpo -c -o nco_ppc.lo nco_ppc.c |
| 06-Mar-2017 11:11:10 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ppc.lo -MD -MP -MF .deps/nco_ppc.Tpo -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o |
| 06-Mar-2017 11:11:10 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_ppc.lo -MD -MP -MF .deps/nco_ppc.Tpo -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:11 | mv -f .deps/nco_ppc.Tpo .deps/nco_ppc.Plo |
| 06-Mar-2017 11:11:11 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_prn.lo -MD -MP -MF .deps/nco_prn.Tpo -c -o nco_prn.lo nco_prn.c |
| 06-Mar-2017 11:11:11 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_prn.lo -MD -MP -MF .deps/nco_prn.Tpo -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o |
| 06-Mar-2017 11:11:13 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_prn.lo -MD -MP -MF .deps/nco_prn.Tpo -c nco_prn.c -o nco_prn.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:15 | mv -f .deps/nco_prn.Tpo .deps/nco_prn.Plo |
| 06-Mar-2017 11:11:15 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rec_var.lo -MD -MP -MF .deps/nco_rec_var.Tpo -c -o nco_rec_var.lo nco_rec_var.c |
| 06-Mar-2017 11:11:15 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rec_var.lo -MD -MP -MF .deps/nco_rec_var.Tpo -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o |
| 06-Mar-2017 11:11:15 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rec_var.lo -MD -MP -MF .deps/nco_rec_var.Tpo -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:15 | mv -f .deps/nco_rec_var.Tpo .deps/nco_rec_var.Plo |
| 06-Mar-2017 11:11:15 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rgr.lo -MD -MP -MF .deps/nco_rgr.Tpo -c -o nco_rgr.lo nco_rgr.c |
| 06-Mar-2017 11:11:15 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rgr.lo -MD -MP -MF .deps/nco_rgr.Tpo -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o |
| 06-Mar-2017 11:11:15 | nco_rgr.c: In function 'nco_rgr_map': |
| 06-Mar-2017 11:11:15 | nco_rgr.c:1607:7: warning: implicit declaration of function 'strcasestr' [-Wimplicit-function-declaration] |
| 06-Mar-2017 11:11:15 | if(!strcasestr(cf->unt_sng[0],"degrees_")) (void)fprintf(stderr,"%s: WARNING %s reports first coordinates variable %s has weird units attribute = %s. May not detect correct ordering of latitude and longitude coordinates\n",nco_prg_nm_get(),fnc_nm,cf->crd_nm[0],cf->unt_sng[0]); |
| 06-Mar-2017 11:11:15 | ^ |
| 06-Mar-2017 11:11:22 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rgr.lo -MD -MP -MF .deps/nco_rgr.Tpo -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:28 | mv -f .deps/nco_rgr.Tpo .deps/nco_rgr.Plo |
| 06-Mar-2017 11:11:28 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_flt.lo -MD -MP -MF .deps/nco_rth_flt.Tpo -c -o nco_rth_flt.lo nco_rth_flt.c |
| 06-Mar-2017 11:11:28 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_flt.lo -MD -MP -MF .deps/nco_rth_flt.Tpo -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o |
| 06-Mar-2017 11:11:28 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_flt.lo -MD -MP -MF .deps/nco_rth_flt.Tpo -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:28 | mv -f .deps/nco_rth_flt.Tpo .deps/nco_rth_flt.Plo |
| 06-Mar-2017 11:11:28 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_utl.lo -MD -MP -MF .deps/nco_rth_utl.Tpo -c -o nco_rth_utl.lo nco_rth_utl.c |
| 06-Mar-2017 11:11:28 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_utl.lo -MD -MP -MF .deps/nco_rth_utl.Tpo -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o |
| 06-Mar-2017 11:11:29 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_rth_utl.lo -MD -MP -MF .deps/nco_rth_utl.Tpo -c nco_rth_utl.c -o nco_rth_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:29 | mv -f .deps/nco_rth_utl.Tpo .deps/nco_rth_utl.Plo |
| 06-Mar-2017 11:11:29 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scl_utl.lo -MD -MP -MF .deps/nco_scl_utl.Tpo -c -o nco_scl_utl.lo nco_scl_utl.c |
| 06-Mar-2017 11:11:29 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scl_utl.lo -MD -MP -MF .deps/nco_scl_utl.Tpo -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o |
| 06-Mar-2017 11:11:29 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scl_utl.lo -MD -MP -MF .deps/nco_scl_utl.Tpo -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:30 | mv -f .deps/nco_scl_utl.Tpo .deps/nco_scl_utl.Plo |
| 06-Mar-2017 11:11:30 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scm.lo -MD -MP -MF .deps/nco_scm.Tpo -c -o nco_scm.lo nco_scm.c |
| 06-Mar-2017 11:11:30 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scm.lo -MD -MP -MF .deps/nco_scm.Tpo -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o |
| 06-Mar-2017 11:11:30 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_scm.lo -MD -MP -MF .deps/nco_scm.Tpo -c nco_scm.c -o nco_scm.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:30 | mv -f .deps/nco_scm.Tpo .deps/nco_scm.Plo |
| 06-Mar-2017 11:11:30 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sld.lo -MD -MP -MF .deps/nco_sld.Tpo -c -o nco_sld.lo nco_sld.c |
| 06-Mar-2017 11:11:30 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sld.lo -MD -MP -MF .deps/nco_sld.Tpo -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o |
| 06-Mar-2017 11:11:31 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sld.lo -MD -MP -MF .deps/nco_sld.Tpo -c nco_sld.c -o nco_sld.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:31 | mv -f .deps/nco_sld.Tpo .deps/nco_sld.Plo |
| 06-Mar-2017 11:11:31 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sng_utl.lo -MD -MP -MF .deps/nco_sng_utl.Tpo -c -o nco_sng_utl.lo nco_sng_utl.c |
| 06-Mar-2017 11:11:31 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sng_utl.lo -MD -MP -MF .deps/nco_sng_utl.Tpo -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o |
| 06-Mar-2017 11:11:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_sng_utl.lo -MD -MP -MF .deps/nco_sng_utl.Tpo -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:32 | mv -f .deps/nco_sng_utl.Tpo .deps/nco_sng_utl.Plo |
| 06-Mar-2017 11:11:32 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_srm.lo -MD -MP -MF .deps/nco_srm.Tpo -c -o nco_srm.lo nco_srm.c |
| 06-Mar-2017 11:11:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_srm.lo -MD -MP -MF .deps/nco_srm.Tpo -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o |
| 06-Mar-2017 11:11:32 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_srm.lo -MD -MP -MF .deps/nco_srm.Tpo -c nco_srm.c -o nco_srm.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:33 | mv -f .deps/nco_srm.Tpo .deps/nco_srm.Plo |
| 06-Mar-2017 11:11:33 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_avg.lo -MD -MP -MF .deps/nco_var_avg.Tpo -c -o nco_var_avg.lo nco_var_avg.c |
| 06-Mar-2017 11:11:33 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_avg.lo -MD -MP -MF .deps/nco_var_avg.Tpo -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o |
| 06-Mar-2017 11:11:34 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_avg.lo -MD -MP -MF .deps/nco_var_avg.Tpo -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:35 | mv -f .deps/nco_var_avg.Tpo .deps/nco_var_avg.Plo |
| 06-Mar-2017 11:11:35 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_lst.lo -MD -MP -MF .deps/nco_var_lst.Tpo -c -o nco_var_lst.lo nco_var_lst.c |
| 06-Mar-2017 11:11:35 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_lst.lo -MD -MP -MF .deps/nco_var_lst.Tpo -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o |
| 06-Mar-2017 11:11:36 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_lst.lo -MD -MP -MF .deps/nco_var_lst.Tpo -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:37 | mv -f .deps/nco_var_lst.Tpo .deps/nco_var_lst.Plo |
| 06-Mar-2017 11:11:37 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_rth.lo -MD -MP -MF .deps/nco_var_rth.Tpo -c -o nco_var_rth.lo nco_var_rth.c |
| 06-Mar-2017 11:11:37 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_rth.lo -MD -MP -MF .deps/nco_var_rth.Tpo -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o |
| 06-Mar-2017 11:11:39 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_rth.lo -MD -MP -MF .deps/nco_var_rth.Tpo -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:41 | mv -f .deps/nco_var_rth.Tpo .deps/nco_var_rth.Plo |
| 06-Mar-2017 11:11:41 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_scv.lo -MD -MP -MF .deps/nco_var_scv.Tpo -c -o nco_var_scv.lo nco_var_scv.c |
| 06-Mar-2017 11:11:41 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_scv.lo -MD -MP -MF .deps/nco_var_scv.Tpo -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o |
| 06-Mar-2017 11:11:42 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_scv.lo -MD -MP -MF .deps/nco_var_scv.Tpo -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:42 | mv -f .deps/nco_var_scv.Tpo .deps/nco_var_scv.Plo |
| 06-Mar-2017 11:11:42 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_utl.lo -MD -MP -MF .deps/nco_var_utl.Tpo -c -o nco_var_utl.lo nco_var_utl.c |
| 06-Mar-2017 11:11:43 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_utl.lo -MD -MP -MF .deps/nco_var_utl.Tpo -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o |
| 06-Mar-2017 11:11:43 | libtool: compile: gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_var_utl.lo -MD -MP -MF .deps/nco_var_utl.Tpo -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:45 | mv -f .deps/nco_var_utl.Tpo .deps/nco_var_utl.Plo |
| 06-Mar-2017 11:11:45 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -release 4.6.1-beta01 -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o libnco.la -rpath /srv/sw/nco-4.6.1/lib nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_grp_utl.lo nco_grp_trv.lo nco_lmt.lo nco_lst_utl.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:45 | libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.9/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/libexpat.so /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu/crtn.o -O2 -fopenmp -fopenmp -Wl,-soname -Wl,libnco-4.6.1-beta01.so -o .libs/libnco-4.6.1-beta01.so |
| 06-Mar-2017 11:11:45 | libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-4.6.1-beta01.so" "libnco.so") |
| 06-Mar-2017 11:11:45 | libtool: link: ar cru .libs/libnco.a nco_att_utl.o nco_aux.o nco_bnr.o nco_cln_utl.o nco_cnf_dmn.o nco_cnf_typ.o nco_cnk.o nco_cnv_arm.o nco_cnv_csm.o nco_ctl.o nco_dbg.o nco_dmn_utl.o nco_fl_utl.o nco_grp_utl.o nco_grp_trv.o nco_lmt.o nco_lst_utl.o nco_md5.o nco_mmr.o nco_msa.o nco_mss_val.o nco_netcdf.o nco_omp.o nco_pck.o nco_ppc.o nco_prn.o nco_rec_var.o nco_rgr.o nco_rth_flt.o nco_rth_utl.o nco_scl_utl.o nco_scm.o nco_sld.o nco_sng_utl.o nco_srm.o nco_var_avg.o nco_var_lst.o nco_var_rth.o nco_var_scv.o nco_var_utl.o |
| 06-Mar-2017 11:11:45 | libtool: link: ranlib .libs/libnco.a |
| 06-Mar-2017 11:11:45 | libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) |
| 06-Mar-2017 11:11:45 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncatted.o -MD -MP -MF .deps/ncatted.Tpo -c -o ncatted.o ncatted.c |
| 06-Mar-2017 11:11:46 | mv -f .deps/ncatted.Tpo .deps/ncatted.Po |
| 06-Mar-2017 11:11:46 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncatted ncatted.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:46 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncatted ncatted.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:46 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncbo.o -MD -MP -MF .deps/ncbo.Tpo -c -o ncbo.o ncbo.c |
| 06-Mar-2017 11:11:47 | mv -f .deps/ncbo.Tpo .deps/ncbo.Po |
| 06-Mar-2017 11:11:47 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncbo ncbo.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:47 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncbo ncbo.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:47 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncecat.o -MD -MP -MF .deps/ncecat.Tpo -c -o ncecat.o ncecat.c |
| 06-Mar-2017 11:11:48 | mv -f .deps/ncecat.Tpo .deps/ncecat.Po |
| 06-Mar-2017 11:11:48 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncecat ncecat.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:48 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncecat ncecat.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:48 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncflint.o -MD -MP -MF .deps/ncflint.Tpo -c -o ncflint.o ncflint.c |
| 06-Mar-2017 11:11:49 | mv -f .deps/ncflint.Tpo .deps/ncflint.Po |
| 06-Mar-2017 11:11:49 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncflint ncflint.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:49 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncflint ncflint.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:49 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncks.o -MD -MP -MF .deps/ncks.Tpo -c -o ncks.o ncks.c |
| 06-Mar-2017 11:11:51 | mv -f .deps/ncks.Tpo .deps/ncks.Po |
| 06-Mar-2017 11:11:51 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncks ncks.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:51 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncks ncks.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:51 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncpdq.o -MD -MP -MF .deps/ncpdq.Tpo -c -o ncpdq.o ncpdq.c |
| 06-Mar-2017 11:11:52 | mv -f .deps/ncpdq.Tpo .deps/ncpdq.Po |
| 06-Mar-2017 11:11:52 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncpdq ncpdq.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:52 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncpdq ncpdq.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:52 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncra.o -MD -MP -MF .deps/ncra.Tpo -c -o ncra.o ncra.c |
| 06-Mar-2017 11:11:54 | mv -f .deps/ncra.Tpo .deps/ncra.Po |
| 06-Mar-2017 11:11:54 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncra ncra.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:54 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncra ncra.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:54 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT ncrename.o -MD -MP -MF .deps/ncrename.Tpo -c -o ncrename.o ncrename.c |
| 06-Mar-2017 11:11:55 | mv -f .deps/ncrename.Tpo .deps/ncrename.Po |
| 06-Mar-2017 11:11:55 | /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncrename ncrename.o libnco.la -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:11:55 | libtool: link: gcc -std=gnu99 -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -o .libs/ncrename ncrename.o -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu ./.libs/libnco.so /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:11:55 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:11:55 | Making all in nco_c++ |
| 06-Mar-2017 11:11:55 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:11:55 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_att.lo -MD -MP -MF .deps/libnco_c___la-nco_att.Tpo -c -o libnco_c___la-nco_att.lo `test -f 'nco_att.cc' || echo './'`nco_att.cc |
| 06-Mar-2017 11:11:55 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_att.lo -MD -MP -MF .deps/libnco_c___la-nco_att.Tpo -c nco_att.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_att.o |
| 06-Mar-2017 11:11:56 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_att.lo -MD -MP -MF .deps/libnco_c___la-nco_att.Tpo -c nco_att.cc -o libnco_c___la-nco_att.o >/dev/null 2>&1 |
| 06-Mar-2017 11:11:58 | mv -f .deps/libnco_c___la-nco_att.Tpo .deps/libnco_c___la-nco_att.Plo |
| 06-Mar-2017 11:11:58 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_dmn.lo -MD -MP -MF .deps/libnco_c___la-nco_dmn.Tpo -c -o libnco_c___la-nco_dmn.lo `test -f 'nco_dmn.cc' || echo './'`nco_dmn.cc |
| 06-Mar-2017 11:11:58 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_dmn.lo -MD -MP -MF .deps/libnco_c___la-nco_dmn.Tpo -c nco_dmn.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_dmn.o |
| 06-Mar-2017 11:11:59 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_dmn.lo -MD -MP -MF .deps/libnco_c___la-nco_dmn.Tpo -c nco_dmn.cc -o libnco_c___la-nco_dmn.o >/dev/null 2>&1 |
| 06-Mar-2017 11:12:00 | mv -f .deps/libnco_c___la-nco_dmn.Tpo .deps/libnco_c___la-nco_dmn.Plo |
| 06-Mar-2017 11:12:00 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_fl.lo -MD -MP -MF .deps/libnco_c___la-nco_fl.Tpo -c -o libnco_c___la-nco_fl.lo `test -f 'nco_fl.cc' || echo './'`nco_fl.cc |
| 06-Mar-2017 11:12:00 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_fl.lo -MD -MP -MF .deps/libnco_c___la-nco_fl.Tpo -c nco_fl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_fl.o |
| 06-Mar-2017 11:12:00 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_fl.lo -MD -MP -MF .deps/libnco_c___la-nco_fl.Tpo -c nco_fl.cc -o libnco_c___la-nco_fl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:12:01 | mv -f .deps/libnco_c___la-nco_fl.Tpo .deps/libnco_c___la-nco_fl.Plo |
| 06-Mar-2017 11:12:01 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_hgh.lo -MD -MP -MF .deps/libnco_c___la-nco_hgh.Tpo -c -o libnco_c___la-nco_hgh.lo `test -f 'nco_hgh.cc' || echo './'`nco_hgh.cc |
| 06-Mar-2017 11:12:01 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_hgh.lo -MD -MP -MF .deps/libnco_c___la-nco_hgh.Tpo -c nco_hgh.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_hgh.o |
| 06-Mar-2017 11:12:02 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_hgh.lo -MD -MP -MF .deps/libnco_c___la-nco_hgh.Tpo -c nco_hgh.cc -o libnco_c___la-nco_hgh.o >/dev/null 2>&1 |
| 06-Mar-2017 11:12:03 | mv -f .deps/libnco_c___la-nco_hgh.Tpo .deps/libnco_c___la-nco_hgh.Plo |
| 06-Mar-2017 11:12:03 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_utl.lo -MD -MP -MF .deps/libnco_c___la-nco_utl.Tpo -c -o libnco_c___la-nco_utl.lo `test -f 'nco_utl.cc' || echo './'`nco_utl.cc |
| 06-Mar-2017 11:12:03 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_utl.lo -MD -MP -MF .deps/libnco_c___la-nco_utl.Tpo -c nco_utl.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_utl.o |
| 06-Mar-2017 11:12:04 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_utl.lo -MD -MP -MF .deps/libnco_c___la-nco_utl.Tpo -c nco_utl.cc -o libnco_c___la-nco_utl.o >/dev/null 2>&1 |
| 06-Mar-2017 11:12:05 | mv -f .deps/libnco_c___la-nco_utl.Tpo .deps/libnco_c___la-nco_utl.Plo |
| 06-Mar-2017 11:12:05 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_var.lo -MD -MP -MF .deps/libnco_c___la-nco_var.Tpo -c -o libnco_c___la-nco_var.lo `test -f 'nco_var.cc' || echo './'`nco_var.cc |
| 06-Mar-2017 11:12:05 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_var.lo -MD -MP -MF .deps/libnco_c___la-nco_var.Tpo -c nco_var.cc -fPIC -DPIC -o .libs/libnco_c___la-nco_var.o |
| 06-Mar-2017 11:12:08 | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT libnco_c___la-nco_var.lo -MD -MP -MF .deps/libnco_c___la-nco_var.Tpo -c nco_var.cc -o libnco_c___la-nco_var.o >/dev/null 2>&1 |
| 06-Mar-2017 11:12:11 | mv -f .deps/libnco_c___la-nco_var.Tpo .deps/libnco_c___la-nco_var.Plo |
| 06-Mar-2017 11:12:11 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=link g++ -g -O2 -release 4.6.1-beta01 -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o libnco_c++.la -rpath /srv/sw/nco-4.6.1/lib libnco_c___la-nco_att.lo libnco_c___la-nco_dmn.lo libnco_c___la-nco_fl.lo libnco_c___la-nco_hgh.lo libnco_c___la-nco_utl.lo libnco_c___la-nco_var.lo -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:12:11 | libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.9/crtbeginS.o .libs/libnco_c___la-nco_att.o .libs/libnco_c___la-nco_dmn.o .libs/libnco_c___la-nco_fl.o .libs/libnco_c___la-nco_hgh.o .libs/libnco_c___la-nco_utl.o .libs/libnco_c___la-nco_var.o -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/libexpat.so /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -L/usr/lib/gcc/x86_64-linux-gnu/4.9 -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.9/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.9/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/4.9/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,libnco_c++-4.6.1-beta01.so -o .libs/libnco_c++-4.6.1-beta01.so |
| 06-Mar-2017 11:12:11 | libtool: link: (cd ".libs" && rm -f "libnco_c++.so" && ln -s "libnco_c++-4.6.1-beta01.so" "libnco_c++.so") |
| 06-Mar-2017 11:12:11 | libtool: link: ar cru .libs/libnco_c++.a libnco_c___la-nco_att.o libnco_c___la-nco_dmn.o libnco_c___la-nco_fl.o libnco_c___la-nco_hgh.o libnco_c___la-nco_utl.o libnco_c___la-nco_var.o |
| 06-Mar-2017 11:12:11 | libtool: link: ranlib .libs/libnco_c++.a |
| 06-Mar-2017 11:12:11 | libtool: link: ( cd ".libs" && rm -f "libnco_c++.la" && ln -s "../libnco_c++.la" "libnco_c++.la" ) |
| 06-Mar-2017 11:12:11 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:12:11 | Making all in nco++ |
| 06-Mar-2017 11:12:11 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:12:11 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT Invoke.o -MD -MP -MF .deps/Invoke.Tpo -c -o Invoke.o Invoke.cc |
| 06-Mar-2017 11:12:15 | mv -f .deps/Invoke.Tpo .deps/Invoke.Po |
| 06-Mar-2017 11:12:15 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT ncap2.o -MD -MP -MF .deps/ncap2.Tpo -c -o ncap2.o ncap2.cc |
| 06-Mar-2017 11:12:19 | mv -f .deps/ncap2.Tpo .deps/ncap2.Po |
| 06-Mar-2017 11:12:19 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT ncap2_utl.o -MD -MP -MF .deps/ncap2_utl.Tpo -c -o ncap2_utl.o ncap2_utl.cc |
| 06-Mar-2017 11:12:36 | mv -f .deps/ncap2_utl.Tpo .deps/ncap2_utl.Po |
| 06-Mar-2017 11:12:36 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT sdo_utl.o -MD -MP -MF .deps/sdo_utl.Tpo -c -o sdo_utl.o sdo_utl.cc |
| 06-Mar-2017 11:12:36 | mv -f .deps/sdo_utl.Tpo .deps/sdo_utl.Po |
| 06-Mar-2017 11:12:36 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT sym_cls.o -MD -MP -MF .deps/sym_cls.Tpo -c -o sym_cls.o sym_cls.cc |
| 06-Mar-2017 11:12:36 | mv -f .deps/sym_cls.Tpo .deps/sym_cls.Po |
| 06-Mar-2017 11:12:36 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT fmc_cls.o -MD -MP -MF .deps/fmc_cls.Tpo -c -o fmc_cls.o fmc_cls.cc |
| 06-Mar-2017 11:12:37 | mv -f .deps/fmc_cls.Tpo .deps/fmc_cls.Po |
| 06-Mar-2017 11:12:37 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT fmc_all_cls.o -MD -MP -MF .deps/fmc_all_cls.Tpo -c -o fmc_all_cls.o fmc_all_cls.cc |
| 06-Mar-2017 11:12:51 | mv -f .deps/fmc_all_cls.Tpo .deps/fmc_all_cls.Po |
| 06-Mar-2017 11:12:51 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT fmc_gsl_cls.o -MD -MP -MF .deps/fmc_gsl_cls.Tpo -c -o fmc_gsl_cls.o fmc_gsl_cls.cc |
| 06-Mar-2017 11:12:51 | mv -f .deps/fmc_gsl_cls.Tpo .deps/fmc_gsl_cls.Po |
| 06-Mar-2017 11:12:51 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT prs_cls.o -MD -MP -MF .deps/prs_cls.Tpo -c -o prs_cls.o prs_cls.cc |
| 06-Mar-2017 11:12:53 | mv -f .deps/prs_cls.Tpo .deps/prs_cls.Po |
| 06-Mar-2017 11:12:53 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT NcapVar.o -MD -MP -MF .deps/NcapVar.Tpo -c -o NcapVar.o NcapVar.cc |
| 06-Mar-2017 11:12:54 | mv -f .deps/NcapVar.Tpo .deps/NcapVar.Po |
| 06-Mar-2017 11:12:54 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT NcapVarVector.o -MD -MP -MF .deps/NcapVarVector.Tpo -c -o NcapVarVector.o NcapVarVector.cc |
| 06-Mar-2017 11:12:56 | mv -f .deps/NcapVarVector.Tpo .deps/NcapVarVector.Po |
| 06-Mar-2017 11:12:56 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT ncoLexer.o -MD -MP -MF .deps/ncoLexer.Tpo -c -o ncoLexer.o ncoLexer.cpp |
| 06-Mar-2017 11:13:01 | mv -f .deps/ncoLexer.Tpo .deps/ncoLexer.Po |
| 06-Mar-2017 11:13:01 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT ncoParser.o -MD -MP -MF .deps/ncoParser.Tpo -c -o ncoParser.o ncoParser.cpp |
| 06-Mar-2017 11:13:08 | mv -f .deps/ncoParser.Tpo .deps/ncoParser.Po |
| 06-Mar-2017 11:13:08 | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -MT ncoTree.o -MD -MP -MF .deps/ncoTree.Tpo -c -o ncoTree.o ncoTree.cpp |
| 06-Mar-2017 11:13:33 | mv -f .deps/ncoTree.Tpo .deps/ncoTree.Po |
| 06-Mar-2017 11:13:33 | gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/netcdf-4.4.1/include -I/usr/include -g -O2 -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -MT nco_gsl.o -MD -MP -MF .deps/nco_gsl.Tpo -c -o nco_gsl.o nco_gsl.c |
| 06-Mar-2017 11:13:33 | mv -f .deps/nco_gsl.Tpo .deps/nco_gsl.Po |
| 06-Mar-2017 11:13:33 | /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=link g++ -g -O2 -L../nco -lnco -lantlr -L/srv/sw/netcdf-4.4.1/lib -lnetcdf -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu -o ncap2 Invoke.o ncap2.o ncap2_utl.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lexpat -lm -lnetcdf -lnetcdf -ludunits2 |
| 06-Mar-2017 11:13:33 | libtool: link: g++ -g -O2 -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -L../nco /srv/downloads/nco-4.6.1/src/nco/.libs/libnco.so -lantlr -L/srv/sw/netcdf-4.4.1/lib -L/usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/libexpat.so -lm /srv/sw/netcdf-4.4.1/lib/libnetcdf.so -ludunits2 -fopenmp -Wl,-rpath -Wl,/srv/sw/nco-4.6.1/lib -Wl,-rpath -Wl,/srv/sw/netcdf-4.4.1/lib |
| 06-Mar-2017 11:13:33 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:13:33 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:33 | make[3]: Nothing to be done for 'all-am'. |
| 06-Mar-2017 11:13:33 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:33 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:33 | Making all in man |
| 06-Mar-2017 11:13:33 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:33 | make[2]: Nothing to be done for 'all'. |
| 06-Mar-2017 11:13:33 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:33 | make[2]: Entering directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:33 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:33 | make[1]: Leaving directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:33 | Making install in data |
| 06-Mar-2017 11:13:33 | make[1]: Entering directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:13:33 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:13:33 | /bin/mkdir -p '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:33 | /usr/bin/install -c ncclimo ncremap '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:33 | make[2]: Nothing to be done for 'install-data-am'. |
| 06-Mar-2017 11:13:33 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:13:33 | make[1]: Leaving directory '/srv/downloads/nco-4.6.1/data' |
| 06-Mar-2017 11:13:33 | Making install in src |
| 06-Mar-2017 11:13:33 | make[1]: Entering directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:33 | Making install in nco |
| 06-Mar-2017 11:13:34 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | /bin/mkdir -p '/srv/sw/nco-4.6.1/lib' |
| 06-Mar-2017 11:13:34 | /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco.la '/srv/sw/nco-4.6.1/lib' |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco-4.6.1-beta01.so /srv/sw/nco-4.6.1/lib/libnco-4.6.1-beta01.so |
| 06-Mar-2017 11:13:34 | libtool: install: (cd /srv/sw/nco-4.6.1/lib && { ln -s -f libnco-4.6.1-beta01.so libnco.so || { rm -f libnco.so && ln -s libnco-4.6.1-beta01.so libnco.so; }; }) |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco.lai /srv/sw/nco-4.6.1/lib/libnco.la |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco.a /srv/sw/nco-4.6.1/lib/libnco.a |
| 06-Mar-2017 11:13:34 | libtool: install: chmod 644 /srv/sw/nco-4.6.1/lib/libnco.a |
| 06-Mar-2017 11:13:34 | libtool: install: ranlib /srv/sw/nco-4.6.1/lib/libnco.a |
| 06-Mar-2017 11:13:34 | libtool: finish: PATH="/srv/sw/gdal/bin:/srv/sw/proj4/bin:/srv/sw/geos/bin:/srv/sw/netcdf-4.4.1/bin:/srv/sw/hdf5-1.8.17/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/sbin" ldconfig -n /srv/sw/nco-4.6.1/lib |
| 06-Mar-2017 11:13:34 | ---------------------------------------------------------------------- |
| 06-Mar-2017 11:13:34 | Libraries have been installed in: |
| 06-Mar-2017 11:13:34 | /srv/sw/nco-4.6.1/lib |
| 06-Mar-2017 11:13:34 | |
| 06-Mar-2017 11:13:34 | If you ever happen to want to link against installed libraries |
| 06-Mar-2017 11:13:34 | in a given directory, LIBDIR, you must either use libtool, and |
| 06-Mar-2017 11:13:34 | specify the full pathname of the library, or use the `-LLIBDIR' |
| 06-Mar-2017 11:13:34 | flag during linking and do at least one of the following: |
| 06-Mar-2017 11:13:34 | - add LIBDIR to the `LD_LIBRARY_PATH' environment variable |
| 06-Mar-2017 11:13:34 | during execution |
| 06-Mar-2017 11:13:34 | - add LIBDIR to the `LD_RUN_PATH' environment variable |
| 06-Mar-2017 11:13:34 | during linking |
| 06-Mar-2017 11:13:34 | - use the `-Wl,-rpath -Wl,LIBDIR' linker flag |
| 06-Mar-2017 11:13:34 | - have your system administrator add LIBDIR to `/etc/ld.so.conf' |
| 06-Mar-2017 11:13:34 | |
| 06-Mar-2017 11:13:34 | See any operating system documentation about shared libraries for |
| 06-Mar-2017 11:13:34 | more information, such as the ld(1) and ld.so(8) manual pages. |
| 06-Mar-2017 11:13:34 | ---------------------------------------------------------------------- |
| 06-Mar-2017 11:13:34 | /bin/mkdir -p '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:34 | /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncatted /srv/sw/nco-4.6.1/bin/ncatted |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncbo /srv/sw/nco-4.6.1/bin/ncbo |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncecat /srv/sw/nco-4.6.1/bin/ncecat |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncflint /srv/sw/nco-4.6.1/bin/ncflint |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncks /srv/sw/nco-4.6.1/bin/ncks |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncpdq /srv/sw/nco-4.6.1/bin/ncpdq |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncra /srv/sw/nco-4.6.1/bin/ncra |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/ncrename /srv/sw/nco-4.6.1/bin/ncrename |
| 06-Mar-2017 11:13:34 | make install-exec-hook |
| 06-Mar-2017 11:13:34 | make[4]: Entering directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | cd /srv/sw/nco-4.6.1/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) |
| 06-Mar-2017 11:13:34 | cd /srv/sw/nco-4.6.1/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) |
| 06-Mar-2017 11:13:34 | cd /srv/sw/nco-4.6.1/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) |
| 06-Mar-2017 11:13:34 | cd /srv/sw/nco-4.6.1/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) |
| 06-Mar-2017 11:13:34 | make[4]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | make[3]: Nothing to be done for 'install-data-am'. |
| 06-Mar-2017 11:13:34 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco' |
| 06-Mar-2017 11:13:34 | Making install in nco_c++ |
| 06-Mar-2017 11:13:34 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:13:34 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:13:34 | /bin/mkdir -p '/srv/sw/nco-4.6.1/lib' |
| 06-Mar-2017 11:13:34 | /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco_c++.la '/srv/sw/nco-4.6.1/lib' |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco_c++-4.6.1-beta01.so /srv/sw/nco-4.6.1/lib/libnco_c++-4.6.1-beta01.so |
| 06-Mar-2017 11:13:34 | libtool: install: (cd /srv/sw/nco-4.6.1/lib && { ln -s -f libnco_c++-4.6.1-beta01.so libnco_c++.so || { rm -f libnco_c++.so && ln -s libnco_c++-4.6.1-beta01.so libnco_c++.so; }; }) |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco_c++.lai /srv/sw/nco-4.6.1/lib/libnco_c++.la |
| 06-Mar-2017 11:13:34 | libtool: install: /usr/bin/install -c .libs/libnco_c++.a /srv/sw/nco-4.6.1/lib/libnco_c++.a |
| 06-Mar-2017 11:13:34 | libtool: install: chmod 644 /srv/sw/nco-4.6.1/lib/libnco_c++.a |
| 06-Mar-2017 11:13:34 | libtool: install: ranlib /srv/sw/nco-4.6.1/lib/libnco_c++.a |
| 06-Mar-2017 11:13:34 | libtool: finish: PATH="/srv/sw/gdal/bin:/srv/sw/proj4/bin:/srv/sw/geos/bin:/srv/sw/netcdf-4.4.1/bin:/srv/sw/hdf5-1.8.17/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/sbin" ldconfig -n /srv/sw/nco-4.6.1/lib |
| 06-Mar-2017 11:13:34 | ---------------------------------------------------------------------- |
| 06-Mar-2017 11:13:34 | Libraries have been installed in: |
| 06-Mar-2017 11:13:34 | /srv/sw/nco-4.6.1/lib |
| 06-Mar-2017 11:13:34 | |
| 06-Mar-2017 11:13:34 | If you ever happen to want to link against installed libraries |
| 06-Mar-2017 11:13:34 | in a given directory, LIBDIR, you must either use libtool, and |
| 06-Mar-2017 11:13:34 | specify the full pathname of the library, or use the `-LLIBDIR' |
| 06-Mar-2017 11:13:34 | flag during linking and do at least one of the following: |
| 06-Mar-2017 11:13:34 | - add LIBDIR to the `LD_LIBRARY_PATH' environment variable |
| 06-Mar-2017 11:13:34 | during execution |
| 06-Mar-2017 11:13:34 | - add LIBDIR to the `LD_RUN_PATH' environment variable |
| 06-Mar-2017 11:13:34 | during linking |
| 06-Mar-2017 11:13:34 | - use the `-Wl,-rpath -Wl,LIBDIR' linker flag |
| 06-Mar-2017 11:13:34 | - have your system administrator add LIBDIR to `/etc/ld.so.conf' |
| 06-Mar-2017 11:13:34 | |
| 06-Mar-2017 11:13:34 | See any operating system documentation about shared libraries for |
| 06-Mar-2017 11:13:34 | more information, such as the ld(1) and ld.so(8) manual pages. |
| 06-Mar-2017 11:13:34 | ---------------------------------------------------------------------- |
| 06-Mar-2017 11:13:34 | /bin/mkdir -p '/srv/sw/nco-4.6.1/include' |
| 06-Mar-2017 11:13:34 | /usr/bin/install -c -m 644 libnco_c++.hh nco_dmn.hh nco_hgh.hh nco_var.hh nco_att.hh nco_fl.hh nco_utl.hh '/srv/sw/nco-4.6.1/include' |
| 06-Mar-2017 11:13:34 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:13:34 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco_c++' |
| 06-Mar-2017 11:13:34 | Making install in nco++ |
| 06-Mar-2017 11:13:34 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:13:35 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:13:35 | /bin/mkdir -p '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:35 | /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap2 '/srv/sw/nco-4.6.1/bin' |
| 06-Mar-2017 11:13:35 | libtool: install: /usr/bin/install -c .libs/ncap2 /srv/sw/nco-4.6.1/bin/ncap2 |
| 06-Mar-2017 11:13:35 | make[3]: Nothing to be done for 'install-data-am'. |
| 06-Mar-2017 11:13:35 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:13:35 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/src/nco++' |
| 06-Mar-2017 11:13:35 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:35 | make[3]: Entering directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:35 | make[3]: Nothing to be done for 'install-exec-am'. |
| 06-Mar-2017 11:13:35 | make[3]: Nothing to be done for 'install-data-am'. |
| 06-Mar-2017 11:13:35 | make[3]: Leaving directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:35 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:35 | make[1]: Leaving directory '/srv/downloads/nco-4.6.1/src' |
| 06-Mar-2017 11:13:35 | Making install in man |
| 06-Mar-2017 11:13:35 | make[1]: Entering directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:35 | make[2]: Entering directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:35 | make[2]: Nothing to be done for 'install-exec-am'. |
| 06-Mar-2017 11:13:35 | /bin/mkdir -p '/srv/sw/nco-4.6.1/share/man/man1' |
| 06-Mar-2017 11:13:35 | /usr/bin/install -c -m 644 ncap.1 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncra.1 ncremap.1 ncrename.1 ncpdq.1 ncrcat.1 ncwa.1 '/srv/sw/nco-4.6.1/share/man/man1' |
| 06-Mar-2017 11:13:35 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:35 | make[1]: Leaving directory '/srv/downloads/nco-4.6.1/man' |
| 06-Mar-2017 11:13:35 | make[1]: Entering directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:35 | make[2]: Entering directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:35 | make[2]: Nothing to be done for 'install-exec-am'. |
| 06-Mar-2017 11:13:35 | make[2]: Nothing to be done for 'install-data-am'. |
| 06-Mar-2017 11:13:35 | make[2]: Leaving directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:35 | make[1]: Leaving directory '/srv/downloads/nco-4.6.1' |
| 06-Mar-2017 11:13:38 | ---> efe526a7dd13 |
| 06-Mar-2017 11:13:38 | Removing intermediate container ae1484587ee5 |
| 06-Mar-2017 11:13:38 | Step 18 : ENV PATH "/srv/sw/nco-4.6.1/bin:${PATH}" LD_LIBRARY_PATH "/srv/sw/nco-4.6.1/lib:${LD_LIBRARY_PATH}" |
| 06-Mar-2017 11:13:38 | ---> Running in 80905016d8ae |
| 06-Mar-2017 11:13:38 | ---> f7e410b14339 |
| 06-Mar-2017 11:13:38 | Removing intermediate container 80905016d8ae |
| 06-Mar-2017 11:13:38 | Step 19 : ENV USERHOME "/home/ubuntu" |
| 06-Mar-2017 11:13:38 | ---> Running in fbadf66387de |
| 06-Mar-2017 11:13:38 | ---> 0c691205a817 |
| 06-Mar-2017 11:13:38 | Removing intermediate container fbadf66387de |
| 06-Mar-2017 11:13:38 | Step 20 : WORKDIR "${USERHOME}" |
| 06-Mar-2017 11:13:38 | ---> Running in 8e8acf3233fc |
| 06-Mar-2017 11:13:38 | ---> ecc829aee502 |
| 06-Mar-2017 11:13:38 | Removing intermediate container 8e8acf3233fc |
| 06-Mar-2017 11:13:38 | Step 21 : RUN cd ${USERHOME} && pip install pika urllib3 requests && CC=gcc CXX=g++ USE_SETUPCFG=0 HDF5_INCDIR=/srv/sw/hdf5-1.8.17/include HDF5_LIBDIR=/srv/sw/hdf5-1.8.17/lib NETCDF4_INCDIR=/srv/sw/netcdf-4.4.1/include NETCDF4_LIBDIR=/srv/sw/netcdf-4.4.1/lib pip install netCDF4 && pip install git+https://opensource.ncsa.illinois.edu/stash/scm/cats/pyclowder.git |
| 06-Mar-2017 11:13:38 | ---> Running in 14c3f98b70bd |
| 06-Mar-2017 11:13:41 | Downloading/unpacking pika |
| 06-Mar-2017 11:13:41 | Requirement already satisfied (use --upgrade to upgrade): urllib3 in /usr/lib/python2.7/dist-packages |
| 06-Mar-2017 11:13:41 | Requirement already satisfied (use --upgrade to upgrade): requests in /usr/lib/python2.7/dist-packages |
| 06-Mar-2017 11:13:41 | Installing collected packages: pika |
| 06-Mar-2017 11:13:41 | Successfully installed pika |
| 06-Mar-2017 11:13:41 | Cleaning up... |
| 06-Mar-2017 11:13:43 | Downloading/unpacking netCDF4 |
| 06-Mar-2017 11:13:43 | Running setup.py (path:/tmp/pip-build-vA6sXN/netCDF4/setup.py) egg_info for package netCDF4 |
| 06-Mar-2017 11:13:43 | Package hdf5 was not found in the pkg-config search path. |
| 06-Mar-2017 11:13:43 | Perhaps you should add the directory containing `hdf5.pc' |
| 06-Mar-2017 11:13:43 | to the PKG_CONFIG_PATH environment variable |
| 06-Mar-2017 11:13:43 | No package 'hdf5' found |
| 06-Mar-2017 11:13:43 | using netcdf library version 4.4.1 |
| 06-Mar-2017 11:13:43 | |
| 06-Mar-2017 11:13:43 | warning: manifest_maker: MANIFEST.in, line 4: 'recursive-include' expects <dir> <pattern1> <pattern2> ... |
| 06-Mar-2017 11:13:43 | |
| 06-Mar-2017 11:13:43 | Requirement already satisfied (use --upgrade to upgrade): numpy>=1.7 in /usr/lib/python2.7/dist-packages (from netCDF4) |
| 06-Mar-2017 11:13:43 | Installing collected packages: netCDF4 |
| 06-Mar-2017 11:13:43 | Running setup.py install for netCDF4 |
| 06-Mar-2017 11:13:44 | Package hdf5 was not found in the pkg-config search path. |
| 06-Mar-2017 11:13:44 | Perhaps you should add the directory containing `hdf5.pc' |
| 06-Mar-2017 11:13:44 | to the PKG_CONFIG_PATH environment variable |
| 06-Mar-2017 11:13:44 | No package 'hdf5' found |
| 06-Mar-2017 11:13:44 | using netcdf library version 4.4.1 |
| 06-Mar-2017 11:13:44 | building 'netCDF4._netCDF4' extension |
| 06-Mar-2017 11:13:44 | gcc -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/srv/sw/netcdf-4.4.1/include -I/srv/sw/hdf5-1.8.17/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c netCDF4/_netCDF4.c -o build/temp.linux-x86_64-2.7/netCDF4/_netCDF4.o |
| 06-Mar-2017 11:13:44 | In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0, |
| 06-Mar-2017 11:13:44 | from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, |
| 06-Mar-2017 11:13:44 | from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, |
| 06-Mar-2017 11:13:44 | from netCDF4/_netCDF4.c:267: |
| 06-Mar-2017 11:13:44 | /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] |
| 06-Mar-2017 11:13:44 | #warning "Using deprecated NumPy API, disable it by " \ |
| 06-Mar-2017 11:13:44 | ^ |
| 06-Mar-2017 11:13:44 | netCDF4/_netCDF4.c: In function ���__pyx_f_7netCDF4_8_netCDF4__set_att���: |
| 06-Mar-2017 11:13:44 | netCDF4/_netCDF4.c:6761:97: warning: passing argument 5 of ���nc_put_att_string��� from incompatible pointer type |
| 06-Mar-2017 11:13:44 | __pyx_v_ierr = nc_put_att_string(__pyx_t_6, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); |
| 06-Mar-2017 11:13:44 | ^ |
| 06-Mar-2017 11:13:44 | In file included from netCDF4/_netCDF4.c:266:0: |
| 06-Mar-2017 11:13:44 | /srv/sw/netcdf-4.4.1/include/netcdf.h:1002:1: note: expected ���const char **��� but argument is of type ���char **��� |
| 06-Mar-2017 11:13:44 | nc_put_att_string(int ncid, int varid, const char *name, |
| 06-Mar-2017 11:13:44 | ^ |
| 06-Mar-2017 11:13:44 | netCDF4/_netCDF4.c:7171:93: warning: passing argument 5 of ���nc_put_att_string��� from incompatible pointer type |
| 06-Mar-2017 11:13:44 | __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); |
| 06-Mar-2017 11:13:44 | ^ |
| 06-Mar-2017 11:13:44 | In file included from netCDF4/_netCDF4.c:266:0: |
| 06-Mar-2017 11:13:44 | /srv/sw/netcdf-4.4.1/include/netcdf.h:1002:1: note: expected ���const char **��� but argument is of type ���char **��� |
| 06-Mar-2017 11:13:44 | nc_put_att_string(int ncid, int varid, const char *name, |
| 06-Mar-2017 11:13:44 | ^ |
| 06-Mar-2017 11:14:09 | netCDF4/_netCDF4.c: In function ���__pyx_f_7netCDF4_8_netCDF4__get_types���: |
| 06-Mar-2017 11:14:09 | netCDF4/_netCDF4.c:8683:5: warning: ���__pyx_v_typeids��� may be used uninitialized in this function [-Wmaybe-uninitialized] |
| 06-Mar-2017 11:14:09 | free(__pyx_v_typeids); |
| 06-Mar-2017 11:14:09 | ^ |
| 06-Mar-2017 11:14:22 | netCDF4/_netCDF4.c: In function ���__pyx_pw_7netCDF4_8_netCDF4_8Variable_1__init__���: |
| 06-Mar-2017 11:14:22 | netCDF4/_netCDF4.c:28371:20: warning: ���__pyx_v_dimids��� may be used uninitialized in this function [-Wmaybe-uninitialized] |
| 06-Mar-2017 11:14:22 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); |
| 06-Mar-2017 11:14:22 | ^ |
| 06-Mar-2017 11:14:22 | netCDF4/_netCDF4.c:26974:8: note: ���__pyx_v_dimids��� was declared here |
| 06-Mar-2017 11:14:22 | int *__pyx_v_dimids; |
| 06-Mar-2017 11:14:22 | ^ |
| 06-Mar-2017 11:14:42 | x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/netCDF4/_netCDF4.o -L/srv/sw/netcdf-4.4.1/lib -L/srv/sw/hdf5-1.8.17/lib -Wl,-R/srv/sw/netcdf-4.4.1/lib -Wl,-R/srv/sw/hdf5-1.8.17/lib -lnetcdf -lhdf5_hl -lhdf5 -lz -o build/lib.linux-x86_64-2.7/netCDF4/_netCDF4.so |
| 06-Mar-2017 11:14:42 | building 'netcdftime._netcdftime' extension |
| 06-Mar-2017 11:14:42 | gcc -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/usr/include/python2.7 -c netcdftime/_netcdftime.c -o build/temp.linux-x86_64-2.7/netcdftime/_netcdftime.o |
| 06-Mar-2017 11:15:11 | x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security build/temp.linux-x86_64-2.7/netcdftime/_netcdftime.o -o build/lib.linux-x86_64-2.7/netcdftime/_netcdftime.so |
| 06-Mar-2017 11:15:11 | |
| 06-Mar-2017 11:15:11 | warning: manifest_maker: MANIFEST.in, line 4: 'recursive-include' expects <dir> <pattern1> <pattern2> ... |
| 06-Mar-2017 11:15:11 | |
| 06-Mar-2017 11:15:11 | Installing ncinfo script to /usr/local/bin |
| 06-Mar-2017 11:15:11 | Installing nc4tonc3 script to /usr/local/bin |
| 06-Mar-2017 11:15:11 | Installing nc3tonc4 script to /usr/local/bin |
| 06-Mar-2017 11:15:11 | Successfully installed netCDF4 |
| 06-Mar-2017 11:15:11 | Cleaning up... |
| 06-Mar-2017 11:15:13 | Downloading/unpacking git+https://opensource.ncsa.illinois.edu/stash/scm/cats/pyclowder.git |
| 06-Mar-2017 11:15:13 | Cloning https://opensource.ncsa.illinois.edu/stash/scm/cats/pyclowder.git to /tmp/pip-lOBfUz-build |
| 06-Mar-2017 11:15:14 | Running setup.py (path:/tmp/pip-lOBfUz-build/setup.py) egg_info for package from git+https://opensource.ncsa.illinois.edu/stash/scm/cats/pyclowder.git |
| 06-Mar-2017 11:15:14 | |
| 06-Mar-2017 11:15:14 | Installing collected packages: pyclowder |
| 06-Mar-2017 11:15:14 | Running setup.py install for pyclowder |
| 06-Mar-2017 11:15:14 | |
| 06-Mar-2017 11:15:14 | Successfully installed pyclowder |
| 06-Mar-2017 11:15:14 | Cleaning up... |
| 06-Mar-2017 11:15:15 | ---> b14a808b17a8 |
| 06-Mar-2017 11:15:15 | Removing intermediate container 14c3f98b70bd |
| 06-Mar-2017 11:15:15 | Step 22 : ENV INPUTDIR "${USERHOME}/input" |
| 06-Mar-2017 11:15:15 | ---> Running in c3efd3d29d36 |
| 06-Mar-2017 11:15:15 | ---> 2e1e7fef47d8 |
| 06-Mar-2017 11:15:15 | Removing intermediate container c3efd3d29d36 |
| 06-Mar-2017 11:15:15 | Step 23 : RUN mkdir -p "${INPUTDIR}" && mkdir -p "${USERHOME}/logs" |
| 06-Mar-2017 11:15:15 | ---> Running in e16641782a13 |
| 06-Mar-2017 11:15:15 | ---> efb8bad3d095 |
| 06-Mar-2017 11:15:15 | Removing intermediate container e16641782a13 |
| 06-Mar-2017 11:15:15 | Step 24 : USER root |
| 06-Mar-2017 11:15:15 | ---> Running in 43dcc6dee73a |
| 06-Mar-2017 11:15:15 | ---> 1a5828566c8b |
| 06-Mar-2017 11:15:15 | Removing intermediate container 43dcc6dee73a |
| 06-Mar-2017 11:15:15 | Step 25 : RUN /bin/sed -i -e 's/^\([^#]*Scripts=\)/#\1/' -e 's/^#\(ShellScripts=\)/\1/' /home/polyglot/polyglot/SoftwareServer.conf |
| 06-Mar-2017 11:15:16 | ---> Running in df483d36fccd |
| 06-Mar-2017 11:15:16 | ---> 855a8ea27f95 |
| 06-Mar-2017 11:15:16 | Removing intermediate container df483d36fccd |
| 06-Mar-2017 11:15:16 | Step 26 : RUN echo "hyperspectral" > /home/polyglot/polyglot/scripts/sh/.aliases.txt |
| 06-Mar-2017 11:15:16 | ---> Running in 589601ce6234 |
| 06-Mar-2017 11:15:17 | ---> 57cd7fef9d33 |
| 06-Mar-2017 11:15:17 | Removing intermediate container 589601ce6234 |
| 06-Mar-2017 11:15:17 | Step 27 : COPY hyperspectral_workflow.sh batch_launcher.sh *.py *.nc *.nco /home/polyglot/polyglot/scripts/sh/auxiliary/ |
| 06-Mar-2017 11:15:17 | ---> 02628a7172c3 |
| 06-Mar-2017 11:15:17 | Removing intermediate container 79d6523af121 |
| 06-Mar-2017 11:15:17 | Step 28 : COPY hyperspectral_convert.sh /home/polyglot/polyglot/scripts/sh/ |
| 06-Mar-2017 11:15:18 | ---> cf7b60d3af7b |
| 06-Mar-2017 11:15:18 | Removing intermediate container 962f241305d0 |
| 06-Mar-2017 11:15:18 | Step 29 : RUN chown polyglot /home/polyglot/polyglot/scripts/sh/hyperspectral_convert.sh && chmod +x /home/polyglot/polyglot/scripts/sh/hyperspectral_convert.sh |
| 06-Mar-2017 11:15:18 | ---> Running in a8c9bb53f9ed |
| 06-Mar-2017 11:15:18 | ---> ad3687af1f38 |
| 06-Mar-2017 11:15:18 | Removing intermediate container a8c9bb53f9ed |
| 06-Mar-2017 11:15:18 | Step 30 : RUN chmod +x /home/polyglot/polyglot/scripts/sh/auxiliary/hyperspectral_workflow.sh |
| 06-Mar-2017 11:15:18 | ---> Running in 20b934a5beb1 |
| 06-Mar-2017 11:15:19 | ---> 426107720e63 |
| 06-Mar-2017 11:15:19 | Removing intermediate container 20b934a5beb1 |
| 06-Mar-2017 11:15:19 | Step 31 : CMD softwareserver |
| 06-Mar-2017 11:15:19 | ---> Running in 6ed891651c4a |
| 06-Mar-2017 11:15:19 | ---> 3606c4907c75 |
| 06-Mar-2017 11:15:19 | Removing intermediate container 6ed891651c4a |
| 06-Mar-2017 11:15:19 | Successfully built 3606c4907c75 |
| 06-Mar-2017 11:15:20 | The push refers to a repository [docker.io/ncsapolyglot/converters-hyperspectral] |
| 06-Mar-2017 11:15:20 | eb0f771e123f: Preparing |
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| 06-Mar-2017 11:15:48 | 16083c04ebbe: Mounted from ncsapolyglot/polyglot |
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| 06-Mar-2017 11:16:00 | 0de9d866d419: Mounted from ncsapolyglot/polyglot |
| 06-Mar-2017 11:16:01 | 149636c85012: Mounted from ncsapolyglot/polyglot |
| 06-Mar-2017 11:16:02 | f96222d75c55: Mounted from ncsapolyglot/polyglot |
| 06-Mar-2017 11:16:08 | cab91a14caff: Pushed |
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| 06-Mar-2017 11:18:39 | master: digest: sha256:68c557888e70abef410e6d836f04fcdd8023be905d6685cb45f7d71003ea2823 size: 6191 |
| 06-Mar-2017 11:18:40 | The push refers to a repository [docker.io/ncsapolyglot/converters-hyperspectral] |
| 06-Mar-2017 11:18:40 | eb0f771e123f: Preparing |
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| 06-Mar-2017 11:18:41 | f96222d75c55: Layer already exists |
| 06-Mar-2017 11:18:41 | latest: digest: sha256:68c557888e70abef410e6d836f04fcdd8023be905d6685cb45f7d71003ea2823 size: 6191 |
| 06-Mar-2017 11:18:41 | Untagged: 8491:latest |
| 06-Mar-2017 11:18:41 | Finished task 'docker build' with result: Success |
| 06-Mar-2017 11:18:41 | Running post build plugin 'Docker Container Cleanup' |
| 06-Mar-2017 11:18:41 | Running post build plugin 'NCover Results Collector' |
| 06-Mar-2017 11:18:41 | Running post build plugin 'Clover Results Collector' |
| 06-Mar-2017 11:18:41 | Running post build plugin 'npm Cache Cleanup' |
| 06-Mar-2017 11:18:41 | Running post build plugin 'Artifact Copier' |
| 06-Mar-2017 11:18:41 | Finalising the build... |
| 06-Mar-2017 11:18:41 | Stopping timer. |
| 06-Mar-2017 11:18:41 | Build POL-HYPERSPECTRAL-JOB1-2 completed. |
| 06-Mar-2017 11:18:41 | Running on server: post build plugin 'NCover Results Collector' |
| 06-Mar-2017 11:18:41 | Running on server: post build plugin 'Build Hanging Detection Configuration' |
| 06-Mar-2017 11:18:41 | Running on server: post build plugin 'Clover Delta Calculator' |
| 06-Mar-2017 11:18:41 | Running on server: post build plugin 'Maven Dependencies Postprocessor' |
| 06-Mar-2017 11:18:41 | All post build plugins have finished |
| 06-Mar-2017 11:18:41 | Generating build results summary... |
| 06-Mar-2017 11:18:41 | Saving build results to disk... |
| 06-Mar-2017 11:18:41 | Logging substituted variables... |
| 06-Mar-2017 11:18:42 | Indexing build results... |
| 06-Mar-2017 11:18:42 | Finished building POL-HYPERSPECTRAL-JOB1-2. |