...
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sudo -s export RABBITMQ_URL="amqp://guest:guest@localhost:5672/%2F" export EXTRACTORS_HOME="/home/mediciclowder" apt-get -y install git python-pip pip install pika requests cd ${EXTRACTORS_HOME} git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/pymedicipyclowder.git chown -R mediciclowder.users pymedicipyclowder |
opencv
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apt-get -y install python-opencv opencv-data
cd ${EXTRACTORS_HOME}
git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-cv.git
for x in opencv-closeups opencv-eyes opencv-faces opencv-profiles; do
ln -s ${EXTRACTORS_HOME}/pymedicipyclowder/pymedicipyclowder ${EXTRACTORS_HOME}/extractors-cv/opencv/$x
sed -i -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" \
-e "s#/usr/local/share/OpenCV#/usr/share/opencv#" ${EXTRACTORS_HOME}/extractors-cv/opencv/$x/config.py
cp ${EXTRACTORS_HOME}/extractors-cv/opencv/$x/*.conf /etc/init
done
chown -R mediciclowder.users extractors-cv
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ocr
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apt-get -y install tesseract-ocr
cd ${EXTRACTORS_HOME}
git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-cv.git
ln -s ${EXTRACTORS_HOME}/pymedicipyclowder/pymedicipyclowder ${EXTRACTORS_HOME}/extractors-cv/ocr
sed -i -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" ${EXTRACTORS_HOME}/extractors-cv/ocr/config.py
cp ${EXTRACTORS_HOME}/extractors-cv/ocr/medici2clowder-ocr.conf /etc/init
chown -R mediciclowder.users pymedicipyclowder |
audio
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apt-get -y install sox libsox-fmt-mp3
cd ${EXTRACTORS_HOME}
git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-audio.git
ln -s ${EXTRACTORS_HOME}/pymedicipyclowder/pymedicipyclowder ${EXTRACTORS_HOME}/extractors-audio/preview/
sed -i -e "s#Binary = .*#Binary = '`which sox`'#" -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" extractors-audio/preview/config.py
cp ${EXTRACTORS_HOME}/extractors-audio/preview/medici2clowder-audio-preview.conf /etc/init
chown -R mediciclowder.users extractors-audio
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image
...
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apt-get -y install imagemagick
cd ${EXTRACTORS_HOME}
git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-image.git
ln -s ${EXTRACTORS_HOME}/pymedicipyclowder/pymedicipyclowder ${EXTRACTORS_HOME}/extractors-image/preview/
sed -i -e "s#imageBinary = .*#imageBinary = '`which convert`'#" -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" extractors-image/preview/config.py
cp ${EXTRACTORS_HOME}/extractors-image/preview/medici2clowder-image-preview.conf /etc/init
chown -R mediciclowder.users extractors-image
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...
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apt-get -y install imagemagick
cd ${EXTRACTORS_HOME}
git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-pdf.git
ln -s ${EXTRACTORS_HOME}/pymedicipyclowder/pymedicipyclowder /home/mediciclowder/extractors-pdf/preview/
sed -i -e "s#Binary = .*#Binary = '`which convert`'#" -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" extractors-pdf/preview/config.py
cp ${EXTRACTORS_HOME}/extractors-pdf/preview/medici2clowder-pdf-preview.conf /etc/init
chown -R mediciclowder.users extractors-pdf
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video
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apt-get -y install libav-tools cd /home/mediciclowder git clone https://opensource.ncsa.illinois.edu/stash/scm/mmdb/extractors-video.git ln -s /home/mediciclowder/pymedicipyclowder/pymedicipyclowder /home/mediciclowder/extractors-video/preview/ sed -i -e "s#Binary = .*#Binary = '`which convert`'#" -e "s#rabbitmqURL = .*#rabbitmqURL = '${RABBITMQ_URL}'#" extractors-video/preview/config.py cp /home/mediciclowder/extractors-video/preview/medici2clowder-video-preview.conf /etc/init chown -R mediciclowder.users extractors-video |
start extractors
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cd /etc/init for x in medici2clowder-*.conf; do start `basename $x .conf` done |