Build: #9 was successful

Job: Default Job was successful

Stages & jobs

  1. Default Stage

Build log

The build generated 326 lines of output. Download or view full build log.

05-Oct-2018 14:34:13 Build Polyglot - converters-ncdump - Default Job #9 (POL-CONVNCDUMP-JOB1-9) started building on agent buildserver-2.os.ncsa.edu
05-Oct-2018 14:34:13 Remote agent on host buildserver-2.os.ncsa.edu
05-Oct-2018 14:34:14 Build working directory is /home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
05-Oct-2018 14:34:14 Executing build Polyglot - converters-ncdump - Default Job #9 (POL-CONVNCDUMP-JOB1-9)
05-Oct-2018 14:34:14 Starting task 'Checkout Default Repository' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
05-Oct-2018 14:34:14 Checking out into /home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
05-Oct-2018 14:34:14 Updating source code to revision: 14ed88c7635a8552680cd5574b4a5809db41aa3d
05-Oct-2018 14:34:14 Creating local git repository in '/home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1/.git'.
05-Oct-2018 14:34:14 Initialized empty Git repository in /home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1/.git/
05-Oct-2018 14:34:14 Fetching 'refs/heads/master' from 'ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git'. Will try to do a shallow fetch.
05-Oct-2018 14:34:14 Warning: Permanently added '[127.0.0.1]:37220' (RSA) to the list of known hosts.
05-Oct-2018 14:34:14 From ssh://127.0.0.1:37220/pol/converters-ncdump
05-Oct-2018 14:34:14 * [new branch]      master     -> master
05-Oct-2018 14:34:14 * [new tag]         browndog_v0.2.0 -> browndog_v0.2.0
05-Oct-2018 14:34:14 * [new tag]         browndog_v0.3.0 -> browndog_v0.3.0
05-Oct-2018 14:34:14 Checking out revision 14ed88c7635a8552680cd5574b4a5809db41aa3d.
05-Oct-2018 14:34:14 Already on 'master'
05-Oct-2018 14:34:14 Updated source code to revision: 14ed88c7635a8552680cd5574b4a5809db41aa3d
05-Oct-2018 14:34:14 Finished task 'Checkout Default Repository' with result: Success
05-Oct-2018 14:34:14 Running pre-build action: VCS Version Collector
05-Oct-2018 14:34:14 Starting task 'make container' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
05-Oct-2018 14:34:14
Beginning to execute external process for build 'Polyglot - converters-ncdump - Default Job #9 (POL-CONVNCDUMP-JOB1-9)'
... running command line:
/home/bamboo/bamboo-agent-home/temp/POL-CONVNCDUMP-JOB1-9-ScriptBuildTask-2842111607623147122.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=master
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster
bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node
bamboo_repository_145064016_git_branch=master
bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster
bamboo_dependency_parent_0=POL-MAIN-174
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_dependency_parent_total=1
bamboo_planRepository_1_branchDisplayName=master
bamboo_repository_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/POL-CONVNCDUMP-JOB1-9
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
bamboo_planRepository_1_name=converters-ncdump
bamboo_buildKey=POL-CONVNCDUMP-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=converters-ncdump
bamboo_repository_145064016_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_planRepository_name=converters-ncdump
bamboo_buildNumber=9
bamboo_shortJobName=Default Job
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/POL-CONVNCDUMP-JOB1-9
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_repository_145064016_branch_name=master
bamboo_agentId=140673028
bamboo_planName=Polyglot - converters-ncdump
bamboo_shortPlanKey=CONVNCDUMP
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node
bamboo_shortJobKey=JOB1
bamboo_repository_145064016_git_username=
bamboo_planRepository_revision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_buildTimeStamp=2018-10-05T14:29:32.928-05:00
bamboo_repository_previous_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_planRepository_previousRevision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_repository_git_branch=master
bamboo_buildResultKey=POL-CONVNCDUMP-JOB1-9
bamboo_repository_branch_name=master
bamboo_buildPlanName=Polyglot - converters-ncdump - Default Job
bamboo_planRepository_1_revision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=converters-ncdump
bamboo_buildFailed=false
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=master
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_git_username=
bamboo_planRepository_1_previousRevision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13
bamboo_planRepository_branchDisplayName=master
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=master
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-1
bamboo_repository_145064016_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_plan_storageTag=plan-144900253
bamboo_repository_145064016_previous_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_planRepository_1_username=
bamboo_planRepository_type=bbserver
bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
bamboo_repository_145064016_name=converters-ncdump
bamboo_planKey=POL-CONVNCDUMP
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=master
05-Oct-2018 14:34:14 docker build -t converters-ncdump .
05-Oct-2018 14:34:14 Sending build context to Docker daemon  4.324MB
05-Oct-2018 14:34:14
05-Oct-2018 14:34:14 Step 1/7 : FROM ncsapolyglot/softwareserver:latest
05-Oct-2018 14:34:14 ---> 2b0face5a639
05-Oct-2018 14:34:14 Step 2/7 : MAINTAINER Kenton McHenry <mchenry@illinois.edu>
05-Oct-2018 14:34:14 ---> Using cache
05-Oct-2018 14:34:14 ---> 6c3ac3e7b6b1
05-Oct-2018 14:34:14 Step 3/7 : USER root
05-Oct-2018 14:34:14 ---> Using cache
05-Oct-2018 14:34:14 ---> 6f830784011c
05-Oct-2018 14:34:14 Step 4/7 : RUN apt-get update && apt-get -y install netcdf-bin &&         /bin/sed -i -e 's/^\([^#]*Scripts=\)/#\1/' -e 's/^#\(ShellScripts=\)/\1/' /home/polyglot/polyglot/SoftwareServer.conf &&         echo "ncdump" > /home/polyglot/polyglot/scripts/sh/.aliases.txt
05-Oct-2018 14:34:15 ---> Running in fe9bc73067a5
05-Oct-2018 14:34:16 Get:1 http://deb.debian.org/debian sid InRelease [233 kB]
05-Oct-2018 14:34:16 Ign:2 http://dl.bintray.com/siegfried/debian wheezy InRelease
05-Oct-2018 14:34:16 Get:3 http://dl.bintray.com/siegfried/debian wheezy Release [1840 B]
05-Oct-2018 14:34:16 Get:5 http://deb.debian.org/debian sid/main amd64 Packages.diff/Index [27.9 kB]
05-Oct-2018 14:34:16 Get:6 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-01-2032.43.pdiff [24.0 kB]
05-Oct-2018 14:34:17 Get:7 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-02-0209.37.pdiff [51.2 kB]
05-Oct-2018 14:34:17 Get:8 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-02-0814.43.pdiff [28.6 kB]
05-Oct-2018 14:34:17 Get:9 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-02-1418.59.pdiff [40.4 kB]
05-Oct-2018 14:34:17 Get:10 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-02-2007.45.pdiff [18.0 kB]
05-Oct-2018 14:34:17 Get:11 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-03-0209.01.pdiff [23.5 kB]
05-Oct-2018 14:34:17 Get:12 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-03-0809.27.pdiff [18.8 kB]
05-Oct-2018 14:34:17 Get:13 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-03-1407.54.pdiff [23.8 kB]
05-Oct-2018 14:34:17 Get:14 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-03-2007.42.pdiff [20.2 kB]
05-Oct-2018 14:34:17 Get:15 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-04-0207.48.pdiff [53.2 kB]
05-Oct-2018 14:34:17 Get:16 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-04-0808.51.pdiff [21.6 kB]
05-Oct-2018 14:34:17 Get:17 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-04-1416.47.pdiff [10.9 kB]
05-Oct-2018 14:34:17 Get:18 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-04-2010.56.pdiff [31.0 kB]
05-Oct-2018 14:34:17 Get:19 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-05-0210.51.pdiff [15.6 kB]
05-Oct-2018 14:34:17 Get:20 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-05-0812.37.pdiff [5086 B]
05-Oct-2018 14:34:17 Get:21 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-05-1412.48.pdiff [38.5 kB]
05-Oct-2018 14:34:17 Get:21 http://deb.debian.org/debian sid/main amd64 Packages 2018-10-05-1412.48.pdiff [38.5 kB]
05-Oct-2018 14:34:18 Fetched 687 kB in 2s (357 kB/s)
05-Oct-2018 14:34:19 Reading package lists...
05-Oct-2018 14:34:20 Reading package lists...
05-Oct-2018 14:34:20 Building dependency tree...
05-Oct-2018 14:34:20 Reading state information...
05-Oct-2018 14:34:20 The following additional packages will be installed:
05-Oct-2018 14:34:20   gcc-8-base libaec0 libcurl3-gnutls libgcc1 libgfortran5 libhdf5-100
05-Oct-2018 14:34:20   libnetcdf13 libquadmath0 libstdc++6 libsz2
05-Oct-2018 14:34:20 The following NEW packages will be installed:
05-Oct-2018 14:34:20   libaec0 libcurl3-gnutls libgfortran5 libhdf5-100 libnetcdf13 libquadmath0
05-Oct-2018 14:34:20   libsz2 netcdf-bin
05-Oct-2018 14:34:20 The following packages will be upgraded:
05-Oct-2018 14:34:20   gcc-8-base libgcc1 libstdc++6
05-Oct-2018 14:34:20 3 upgraded, 8 newly installed, 0 to remove and 42 not upgraded.
05-Oct-2018 14:34:20 Need to get 3568 kB of archives.
05-Oct-2018 14:34:20 After this operation, 9935 kB of additional disk space will be used.
05-Oct-2018 14:34:20 Get:1 http://deb.debian.org/debian sid/main amd64 gcc-8-base amd64 8.2.0-7 [187 kB]
05-Oct-2018 14:34:20 Get:2 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 8.2.0-7 [394 kB]
05-Oct-2018 14:34:20 Get:3 http://deb.debian.org/debian sid/main amd64 libgcc1 amd64 1:8.2.0-7 [40.7 kB]
05-Oct-2018 14:34:20 Get:4 http://deb.debian.org/debian sid/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB]
05-Oct-2018 14:34:20 Get:5 http://deb.debian.org/debian sid/main amd64 libcurl3-gnutls amd64 7.61.0-1 [316 kB]
05-Oct-2018 14:34:20 Get:6 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 8.2.0-7 [133 kB]
05-Oct-2018 14:34:20 Get:7 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 8.2.0-7 [581 kB]
05-Oct-2018 14:34:20 Get:8 http://deb.debian.org/debian sid/main amd64 libsz2 amd64 1.0.2-1 [6676 B]
05-Oct-2018 14:34:20 Get:9 http://deb.debian.org/debian sid/main amd64 libhdf5-100 amd64 1.10.0-patch1+docs-4+b2 [1266 kB]
05-Oct-2018 14:34:21 Get:10 http://deb.debian.org/debian sid/main amd64 libnetcdf13 amd64 1:4.6.1-3 [394 kB]
05-Oct-2018 14:34:21 Get:11 http://deb.debian.org/debian sid/main amd64 netcdf-bin amd64 1:4.6.1-3 [230 kB]
05-Oct-2018 14:34:21 debconf: delaying package configuration, since apt-utils is not installed
05-Oct-2018 14:34:22 Fetched 3568 kB in 1s (3335 kB/s)
05-Oct-2018 14:34:22 (Reading database ...
05-Oct-2018 14:34:22 (Reading database ... 5%
05-Oct-2018 14:34:22 (Reading database ... 10%
05-Oct-2018 14:34:22 (Reading database ... 15%
05-Oct-2018 14:34:22 (Reading database ... 20%
05-Oct-2018 14:34:22 (Reading database ... 25%
05-Oct-2018 14:34:22 (Reading database ... 30%
05-Oct-2018 14:34:22 (Reading database ... 35%
05-Oct-2018 14:34:22 (Reading database ... 40%
05-Oct-2018 14:34:22 (Reading database ... 45%
05-Oct-2018 14:34:22 (Reading database ... 50%
05-Oct-2018 14:34:22 (Reading database ... 55%
05-Oct-2018 14:34:22 (Reading database ... 60%
05-Oct-2018 14:34:22 (Reading database ... 65%
05-Oct-2018 14:34:22 (Reading database ... 70%
05-Oct-2018 14:34:22 (Reading database ... 75%
05-Oct-2018 14:34:22 (Reading database ... 80%
05-Oct-2018 14:34:22 (Reading database ... 85%
05-Oct-2018 14:34:22 (Reading database ... 90%
05-Oct-2018 14:34:22 (Reading database ... 95%
05-Oct-2018 14:34:22 (Reading database ... 100%
05-Oct-2018 14:34:22 (Reading database ... 19838 files and directories currently installed.)
05-Oct-2018 14:34:22 Preparing to unpack .../gcc-8-base_8.2.0-7_amd64.deb ...
05-Oct-2018 14:34:22 Unpacking gcc-8-base:amd64 (8.2.0-7) over (8.2.0-4) ...
05-Oct-2018 14:34:23 Setting up gcc-8-base:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:24 (Reading database ...
05-Oct-2018 14:34:24 (Reading database ... 5%
05-Oct-2018 14:34:24 (Reading database ... 10%
05-Oct-2018 14:34:24 (Reading database ... 15%
05-Oct-2018 14:34:24 (Reading database ... 20%
05-Oct-2018 14:34:24 (Reading database ... 25%
05-Oct-2018 14:34:24 (Reading database ... 30%
05-Oct-2018 14:34:24 (Reading database ... 35%
05-Oct-2018 14:34:24 (Reading database ... 40%
05-Oct-2018 14:34:24 (Reading database ... 45%
05-Oct-2018 14:34:24 (Reading database ... 50%
05-Oct-2018 14:34:24 (Reading database ... 55%
05-Oct-2018 14:34:24 (Reading database ... 60%
05-Oct-2018 14:34:24 (Reading database ... 65%
05-Oct-2018 14:34:24 (Reading database ... 70%
05-Oct-2018 14:34:24 (Reading database ... 75%
05-Oct-2018 14:34:24 (Reading database ... 80%
05-Oct-2018 14:34:24 (Reading database ... 85%
05-Oct-2018 14:34:24 (Reading database ... 90%
05-Oct-2018 14:34:24 (Reading database ... 95%
05-Oct-2018 14:34:24 (Reading database ... 100%
05-Oct-2018 14:34:24 (Reading database ... 19838 files and directories currently installed.)
05-Oct-2018 14:34:24 Preparing to unpack .../libstdc++6_8.2.0-7_amd64.deb ...
05-Oct-2018 14:34:24 Unpacking libstdc++6:amd64 (8.2.0-7) over (8.2.0-4) ...
05-Oct-2018 14:34:26 Setting up libstdc++6:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:26 (Reading database ...
05-Oct-2018 14:34:26 (Reading database ... 5%
05-Oct-2018 14:34:26 (Reading database ... 10%
05-Oct-2018 14:34:26 (Reading database ... 15%
05-Oct-2018 14:34:26 (Reading database ... 20%
05-Oct-2018 14:34:26 (Reading database ... 25%
05-Oct-2018 14:34:26 (Reading database ... 30%
05-Oct-2018 14:34:26 (Reading database ... 35%
05-Oct-2018 14:34:26 (Reading database ... 40%
05-Oct-2018 14:34:26 (Reading database ... 45%
05-Oct-2018 14:34:26 (Reading database ... 50%
05-Oct-2018 14:34:26 (Reading database ... 55%
05-Oct-2018 14:34:26 (Reading database ... 60%
05-Oct-2018 14:34:26 (Reading database ... 65%
05-Oct-2018 14:34:26 (Reading database ... 70%
05-Oct-2018 14:34:26 (Reading database ... 75%
05-Oct-2018 14:34:26 (Reading database ... 80%
05-Oct-2018 14:34:26 (Reading database ... 85%
05-Oct-2018 14:34:26 (Reading database ... 90%
05-Oct-2018 14:34:26 (Reading database ... 95%
05-Oct-2018 14:34:26 (Reading database ... 100%
05-Oct-2018 14:34:26 (Reading database ... 19838 files and directories currently installed.)
05-Oct-2018 14:34:26 Preparing to unpack .../libgcc1_1%3a8.2.0-7_amd64.deb ...
05-Oct-2018 14:34:27 Unpacking libgcc1:amd64 (1:8.2.0-7) over (1:8.2.0-4) ...
05-Oct-2018 14:34:27 Setting up libgcc1:amd64 (1:8.2.0-7) ...
05-Oct-2018 14:34:28 Selecting previously unselected package libaec0:amd64.
05-Oct-2018 14:34:28 (Reading database ...
05-Oct-2018 14:34:28 (Reading database ... 5%
05-Oct-2018 14:34:28 (Reading database ... 10%
05-Oct-2018 14:34:28 (Reading database ... 15%
05-Oct-2018 14:34:28 (Reading database ... 20%
05-Oct-2018 14:34:28 (Reading database ... 25%
05-Oct-2018 14:34:28 (Reading database ... 30%
05-Oct-2018 14:34:28 (Reading database ... 35%
05-Oct-2018 14:34:28 (Reading database ... 40%
05-Oct-2018 14:34:28 (Reading database ... 45%
05-Oct-2018 14:34:28 (Reading database ... 50%
05-Oct-2018 14:34:28 (Reading database ... 55%
05-Oct-2018 14:34:28 (Reading database ... 60%
05-Oct-2018 14:34:28 (Reading database ... 65%
05-Oct-2018 14:34:28 (Reading database ... 70%
05-Oct-2018 14:34:28 (Reading database ... 75%
05-Oct-2018 14:34:28 (Reading database ... 80%
05-Oct-2018 14:34:28 (Reading database ... 85%
05-Oct-2018 14:34:28 (Reading database ... 90%
05-Oct-2018 14:34:28 (Reading database ... 95%
05-Oct-2018 14:34:28 (Reading database ... 100%
05-Oct-2018 14:34:28 (Reading database ... 19838 files and directories currently installed.)
05-Oct-2018 14:34:28 Preparing to unpack .../0-libaec0_1.0.2-1_amd64.deb ...
05-Oct-2018 14:34:28 Unpacking libaec0:amd64 (1.0.2-1) ...
05-Oct-2018 14:34:29 Selecting previously unselected package libcurl3-gnutls:amd64.
05-Oct-2018 14:34:29 Preparing to unpack .../1-libcurl3-gnutls_7.61.0-1_amd64.deb ...
05-Oct-2018 14:34:30 Unpacking libcurl3-gnutls:amd64 (7.61.0-1) ...
05-Oct-2018 14:34:31 Selecting previously unselected package libquadmath0:amd64.
05-Oct-2018 14:34:31 Preparing to unpack .../2-libquadmath0_8.2.0-7_amd64.deb ...
05-Oct-2018 14:34:31 Unpacking libquadmath0:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:32 Selecting previously unselected package libgfortran5:amd64.
05-Oct-2018 14:34:32 Preparing to unpack .../3-libgfortran5_8.2.0-7_amd64.deb ...
05-Oct-2018 14:34:32 Unpacking libgfortran5:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:33 Selecting previously unselected package libsz2:amd64.
05-Oct-2018 14:34:33 Preparing to unpack .../4-libsz2_1.0.2-1_amd64.deb ...
05-Oct-2018 14:34:33 Unpacking libsz2:amd64 (1.0.2-1) ...
05-Oct-2018 14:34:34 Selecting previously unselected package libhdf5-100:amd64.
05-Oct-2018 14:34:34 Preparing to unpack .../5-libhdf5-100_1.10.0-patch1+docs-4+b2_amd64.deb ...
05-Oct-2018 14:34:34 Unpacking libhdf5-100:amd64 (1.10.0-patch1+docs-4+b2) ...
05-Oct-2018 14:34:35 Selecting previously unselected package libnetcdf13:amd64.
05-Oct-2018 14:34:35 Preparing to unpack .../6-libnetcdf13_1%3a4.6.1-3_amd64.deb ...
05-Oct-2018 14:34:35 Unpacking libnetcdf13:amd64 (1:4.6.1-3) ...
05-Oct-2018 14:34:36 Selecting previously unselected package netcdf-bin.
05-Oct-2018 14:34:36 Preparing to unpack .../7-netcdf-bin_1%3a4.6.1-3_amd64.deb ...
05-Oct-2018 14:34:36 Unpacking netcdf-bin (1:4.6.1-3) ...
05-Oct-2018 14:34:36 Setting up libquadmath0:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:37 Setting up libaec0:amd64 (1.0.2-1) ...
05-Oct-2018 14:34:37 Setting up libcurl3-gnutls:amd64 (7.61.0-1) ...
05-Oct-2018 14:34:38 Processing triggers for libc-bin (2.27-5) ...
05-Oct-2018 14:34:38 Setting up libgfortran5:amd64 (8.2.0-7) ...
05-Oct-2018 14:34:38 Setting up libsz2:amd64 (1.0.2-1) ...
05-Oct-2018 14:34:39 Setting up libhdf5-100:amd64 (1.10.0-patch1+docs-4+b2) ...
05-Oct-2018 14:34:39 Setting up libnetcdf13:amd64 (1:4.6.1-3) ...
05-Oct-2018 14:34:39 Setting up netcdf-bin (1:4.6.1-3) ...
05-Oct-2018 14:34:39 Processing triggers for libc-bin (2.27-5) ...
05-Oct-2018 14:34:42 Removing intermediate container fe9bc73067a5
05-Oct-2018 14:34:42 ---> 9d5a7601fa32
05-Oct-2018 14:34:42 Step 5/7 : COPY ncdump_convert.sh /home/polyglot/polyglot/scripts/sh/
05-Oct-2018 14:34:42 ---> 68f5a35e5f10
05-Oct-2018 14:34:42 Step 6/7 : RUN chown polyglot /home/polyglot/polyglot/scripts/sh/ncdump_convert.sh &&     chmod +x /home/polyglot/polyglot/scripts/sh/ncdump_convert.sh
05-Oct-2018 14:34:43 ---> Running in 2af3a894885c
05-Oct-2018 14:34:45 Removing intermediate container 2af3a894885c
05-Oct-2018 14:34:45 ---> 64a68ddcf231
05-Oct-2018 14:34:45 Step 7/7 : CMD ["softwareserver"]
05-Oct-2018 14:34:45 ---> Running in ace6e565f231
05-Oct-2018 14:34:46 Removing intermediate container ace6e565f231
05-Oct-2018 14:34:46 ---> 7d7e394a412d
05-Oct-2018 14:34:46 Successfully built 7d7e394a412d
05-Oct-2018 14:34:46 Successfully tagged converters-ncdump:latest
05-Oct-2018 14:34:46 Finished task 'make container' with result: Success
05-Oct-2018 14:34:46 Starting task 'make push' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
05-Oct-2018 14:34:46
Beginning to execute external process for build 'Polyglot - converters-ncdump - Default Job #9 (POL-CONVNCDUMP-JOB1-9)'
... running command line:
/home/bamboo/bamboo-agent-home/temp/POL-CONVNCDUMP-JOB1-9-ScriptBuildTask-1727156054946799130.sh
... in: /home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
... using extra environment variables:
bamboo_planRepository_1_branch=master
bamboo_capability_system_builder_command_npm_6=/home/bamboo/node-v6.9.1/bin/npm
bamboo_capability_system_builder_command_buckminster_4_3=/home/bamboo/buckminster-4.3/buckminster
bamboo_capability_system_builder_node_Node_js_v6_9_1=/home/bamboo/node-v6.9.1/bin/node
bamboo_repository_145064016_git_branch=master
bamboo_capability_system_builder_command_buckminster_4_4=/home/bamboo/buckminster-4.4/buckminster
bamboo_dependency_parent_0=POL-MAIN-174
bamboo_capability_system_builder_command_buckminster_4_2=/home/bamboo/buckminster-4.2/buckminster
bamboo_dependency_parent_total=1
bamboo_planRepository_1_branchDisplayName=master
bamboo_repository_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_resultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/POL-CONVNCDUMP-JOB1-9
bamboo_capability_system_builder_command_sphinx=/usr/bin/sphinx-build
bamboo_build_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
bamboo_planRepository_1_name=converters-ncdump
bamboo_buildKey=POL-CONVNCDUMP-JOB1
bamboo_capability_system_os=linux
bamboo_shortPlanName=converters-ncdump
bamboo_repository_145064016_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_planRepository_name=converters-ncdump
bamboo_buildNumber=9
bamboo_shortJobName=Default Job
bamboo_buildResultsUrl=https://opensource.ncsa.illinois.edu/bamboo/browse/POL-CONVNCDUMP-JOB1-9
bamboo_planRepository_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_repository_145064016_branch_name=master
bamboo_agentId=140673028
bamboo_planName=Polyglot - converters-ncdump
bamboo_shortPlanKey=CONVNCDUMP
bamboo_capability_system_builder_command_sbt_0_13=/home/bamboo/sbt-0.13.2/bin/sbt
bamboo_capability_system_builder_node_Node_js_v0_10_28=/home/bamboo/node-v0.10.28/bin/node
bamboo_shortJobKey=JOB1
bamboo_repository_145064016_git_username=
bamboo_planRepository_revision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_buildTimeStamp=2018-10-05T14:29:32.928-05:00
bamboo_repository_previous_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_command_npm=/home/bamboo/node-v0.10.28/bin/npm
bamboo_capability_system_builder_mvn2_Maven_2=/home/bamboo/apache-maven-2.2.1
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_3=/home/bamboo/bamboo-agent-home/temp/POL-CONVNCDUMP-JOB1-9-ScriptBuildTask-2842111607623147122.sh
bamboo_planRepository_previousRevision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_repository_git_branch=master
bamboo_buildResultKey=POL-CONVNCDUMP-JOB1-9
bamboo_repository_branch_name=master
bamboo_buildPlanName=Polyglot - converters-ncdump - Default Job
bamboo_planRepository_1_revision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_command_python3=/usr/bin/python3
bamboo_repository_name=converters-ncdump
bamboo_buildFailed=false
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_capability_system_builder_command_grunt=/home/bamboo/node-v0.10.28/bin/grunt
bamboo_planRepository_branch=master
bamboo_agentWorkingDirectory=/home/bamboo/bamboo-agent-home/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_repository_git_username=
bamboo_planRepository_1_previousRevision=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_capability_system_builder_sbt_SBT_0_13_13=/home/bamboo/sbt-0.13.13
bamboo_planRepository_branchDisplayName=master
bamboo_capability_system_builder_command_phantomjs=/home/bamboo/phantomjs-1.9.8/bin/phantomjs
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=master
bamboo_capability_system_builder_command_python2_7=/usr/bin/python2.7
bamboo_capability_system_hostname=buildserver-1
bamboo_repository_145064016_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_capability_system_jdk_JDK=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_software_mongo=/usr/bin/mongo
bamboo_plan_storageTag=plan-144900253
bamboo_repository_145064016_previous_revision_number=14ed88c7635a8552680cd5574b4a5809db41aa3d
bamboo_hg_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_hg-repositories-cache
bamboo_capability_system_builder_command_casperjs=/home/bamboo/node-v0.10.28/bin/casperjs
bamboo_capability_system_software_rabbitmq=/usr/sbin/rabbitmqctl
bamboo_capability_system_jdk_JDK_1_8_0_66=/home/bamboo/jdk1.8.0_66
bamboo_planRepository_1_username=
bamboo_planRepository_type=bbserver
bamboo_git_cache_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/_git-repositories-cache
bamboo_repository_git_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_capability_system_builder_node_Node_js=/home/bamboo/node-v0.10.28/bin/node
bamboo_capability_system_builder_ant_Ant=/home/bamboo/apache-ant-1.9.4
bamboo_capability_system_builder_mvn3_Maven_3=/home/bamboo/apache-maven-3.3.9
bamboo_tmp_directory=/home/bamboo/bamboo-agent-home/temp
bamboo_working_directory=/home/bamboo/bamboo-agent-home/xml-data/build-dir/POL-CONVNCDUMP-JOB1
bamboo_repository_145064016_name=converters-ncdump
bamboo_planKey=POL-CONVNCDUMP
bamboo_planRepository_1_repositoryUrl=ssh://git@opensource.ncsa.illinois.edu:7999/pol/converters-ncdump.git
bamboo_planRepository_username=
bamboo_capability_system_jdk_JDK_1_8=/home/bamboo/jdk1.8.0_66
bamboo_capability_system_jdk_JDK_1_6=/home/bamboo/jdk1.6.0_41
bamboo_capability_system_builder_command_mkcrx=/home/bamboo/mkcrx/mkcrx.sh
bamboo_capability_system_jdk_JDK_1_7=/home/bamboo/jdk1.7.0_60
bamboo_planRepository_1_branchName=master
05-Oct-2018 14:34:46 docker build -t converters-ncdump .
05-Oct-2018 14:34:46 Sending build context to Docker daemon  4.324MB
05-Oct-2018 14:34:46
05-Oct-2018 14:34:46 Step 1/7 : FROM ncsapolyglot/softwareserver:latest
05-Oct-2018 14:34:46 ---> 2b0face5a639
05-Oct-2018 14:34:46 Step 2/7 : MAINTAINER Kenton McHenry <mchenry@illinois.edu>
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 6c3ac3e7b6b1
05-Oct-2018 14:34:46 Step 3/7 : USER root
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 6f830784011c
05-Oct-2018 14:34:46 Step 4/7 : RUN apt-get update && apt-get -y install netcdf-bin &&         /bin/sed -i -e 's/^\([^#]*Scripts=\)/#\1/' -e 's/^#\(ShellScripts=\)/\1/' /home/polyglot/polyglot/SoftwareServer.conf &&         echo "ncdump" > /home/polyglot/polyglot/scripts/sh/.aliases.txt
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 9d5a7601fa32
05-Oct-2018 14:34:46 Step 5/7 : COPY ncdump_convert.sh /home/polyglot/polyglot/scripts/sh/
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 68f5a35e5f10
05-Oct-2018 14:34:46 Step 6/7 : RUN chown polyglot /home/polyglot/polyglot/scripts/sh/ncdump_convert.sh &&     chmod +x /home/polyglot/polyglot/scripts/sh/ncdump_convert.sh
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 64a68ddcf231
05-Oct-2018 14:34:46 Step 7/7 : CMD ["softwareserver"]
05-Oct-2018 14:34:46 ---> Using cache
05-Oct-2018 14:34:46 ---> 7d7e394a412d
05-Oct-2018 14:34:46 Successfully built 7d7e394a412d
05-Oct-2018 14:34:46 Successfully tagged converters-ncdump:latest
05-Oct-2018 14:34:46 #ifeq (latest, latest)
05-Oct-2018 14:34:46 docker tag converters-ncdump ncsapolyglot/converters-ncdump:latest
05-Oct-2018 14:34:46 docker push ncsapolyglot/converters-ncdump:latest
05-Oct-2018 14:34:47 The push refers to repository [docker.io/ncsapolyglot/converters-ncdump]
05-Oct-2018 14:34:47 3df3f40ad581: Preparing
05-Oct-2018 14:34:47 6608d243ce9d: Preparing
05-Oct-2018 14:34:47 92f693acd9b2: Preparing
05-Oct-2018 14:34:47 d5b9faa0fd54: Preparing
05-Oct-2018 14:34:47 dbde977a69f4: Preparing
05-Oct-2018 14:34:47 810547d9a45a: Preparing
05-Oct-2018 14:34:47 5aacc94700f8: Preparing
05-Oct-2018 14:34:47 f2d156f7dd34: Preparing
05-Oct-2018 14:34:47 a641f504caa7: Preparing
05-Oct-2018 14:34:47 96aca4405d7d: Preparing
05-Oct-2018 14:34:47 4f2e5aa83bb1: Preparing
05-Oct-2018 14:34:47 acc0d089c92c: Preparing
05-Oct-2018 14:34:47 1693f148d3f8: Preparing
05-Oct-2018 14:34:47 4b5fffa509ea: Preparing
05-Oct-2018 14:34:47 c861a17789be: Preparing
05-Oct-2018 14:34:47 36f183b54972: Preparing
05-Oct-2018 14:34:47 4f2e5aa83bb1: Waiting
05-Oct-2018 14:34:47 810547d9a45a: Waiting
05-Oct-2018 14:34:47 acc0d089c92c: Waiting
05-Oct-2018 14:34:47 5aacc94700f8: Waiting
05-Oct-2018 14:34:47 f2d156f7dd34: Waiting
05-Oct-2018 14:34:47 1693f148d3f8: Waiting
05-Oct-2018 14:34:47 a641f504caa7: Waiting
05-Oct-2018 14:34:47 4b5fffa509ea: Waiting
05-Oct-2018 14:34:47 96aca4405d7d: Waiting
05-Oct-2018 14:34:47 c861a17789be: Waiting
05-Oct-2018 14:34:47 36f183b54972: Waiting
05-Oct-2018 14:34:47 dbde977a69f4: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:48 d5b9faa0fd54: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:48 810547d9a45a: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:48 5aacc94700f8: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:49 6608d243ce9d: Pushed
05-Oct-2018 14:34:49 3df3f40ad581: Pushed
05-Oct-2018 14:34:49 f2d156f7dd34: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:49 a641f504caa7: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:50 96aca4405d7d: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:50 4f2e5aa83bb1: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:50 acc0d089c92c: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:50 1693f148d3f8: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:51 4b5fffa509ea: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:51 c861a17789be: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:51 92f693acd9b2: Pushed
05-Oct-2018 14:34:51 36f183b54972: Mounted from ncsapolyglot/converters-txt2html
05-Oct-2018 14:34:53 latest: digest: sha256:b58b8be88f10de5fd5a556205aed20fed2fabd307ffa33379f488e21e1f94d05 size: 3668
05-Oct-2018 14:34:53 #endif
05-Oct-2018 14:34:53 Finished task 'make push' with result: Success
05-Oct-2018 14:34:53 Running post build plugin 'Docker Container Cleanup'
05-Oct-2018 14:34:53 Running post build plugin 'NCover Results Collector'
05-Oct-2018 14:34:53 Running post build plugin 'Clover Results Collector'
05-Oct-2018 14:34:53 Running post build plugin 'npm Cache Cleanup'
05-Oct-2018 14:34:53 Running post build plugin 'Artifact Copier'
05-Oct-2018 14:34:53 Finalising the build...
05-Oct-2018 14:34:53 Stopping timer.
05-Oct-2018 14:34:53 Build POL-CONVNCDUMP-JOB1-9 completed.
05-Oct-2018 14:34:53 Running on server: post build plugin 'NCover Results Collector'
05-Oct-2018 14:34:53 Running on server: post build plugin 'Build Hanging Detection Configuration'
05-Oct-2018 14:34:53 Running on server: post build plugin 'Clover Delta Calculator'
05-Oct-2018 14:34:54 Running on server: post build plugin 'Maven Dependencies Postprocessor'
05-Oct-2018 14:34:54 All post build plugins have finished
05-Oct-2018 14:34:54 Generating build results summary...
05-Oct-2018 14:34:54 Saving build results to disk...
05-Oct-2018 14:34:54 Logging substituted variables...
05-Oct-2018 14:34:54 Indexing build results...
05-Oct-2018 14:34:54 Finished building POL-CONVNCDUMP-JOB1-9.